FCGBP report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
goblet cell	9 studies	91% ± 9%	Explore
macrophage	7 studies	25% ± 8%	Explore
microglial cell	5 studies	30% ± 14%	Explore
duct epithelial cell	4 studies	38% ± 10%	Explore
respiratory goblet cell	4 studies	21% ± 1%	Explore
secretory cell	4 studies	26% ± 15%	Explore
mucus secreting cell	4 studies	60% ± 32%	Explore
transit amplifying cell	3 studies	30% ± 7%	Explore
myeloid cell	3 studies	23% ± 5%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
intestine	4 studies	28% ± 12%	Explore
brain	3 studies	19% ± 3%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	100%	56258.92	653 / 653	95%	131.32	576 / 605
intestine	72%	64051.11	692 / 966	73%	187.66	383 / 527
stomach	72%	9759.13	259 / 359	62%	98.90	178 / 286
pancreas	53%	1243.14	174 / 328	69%	102.42	122 / 178
adrenal gland	86%	5327.52	223 / 258	13%	5.63	30 / 230
kidney	67%	2576.71	60 / 89	31%	9.19	275 / 901
ovary	49%	1840.22	89 / 180	44%	14.12	189 / 430
brain	17%	450.77	442 / 2642	64%	58.19	450 / 705
skin	70%	3422.26	1262 / 1809	11%	3.18	50 / 472
breast	45%	1541.10	205 / 459	33%	11.06	369 / 1118
lung	38%	850.32	220 / 578	37%	19.12	430 / 1155
bladder	43%	1373.62	9 / 21	32%	44.37	161 / 504
esophagus	27%	914.30	388 / 1445	45%	41.08	82 / 183
blood vessel	72%	3985.14	956 / 1335	0%	0	0 / 0
prostate	54%	1943.89	132 / 245	17%	5.44	86 / 502
uterus	27%	899.44	46 / 170	41%	30.97	186 / 459
tonsil	0%	0	0 / 0	60%	22.86	27 / 45
adipose	59%	2985.46	707 / 1204	0%	0	0 / 0
spleen	27%	418.17	66 / 241	0%	0	0 / 0
heart	22%	626.30	190 / 861	0%	0	0 / 0
liver	4%	79.26	10 / 226	11%	3.46	45 / 406
eye	0%	0	0 / 0	5%	0.93	4 / 80
muscle	1%	30.54	12 / 803	0%	0	0 / 0
peripheral blood	1%	28.50	12 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1