I. Expression across cell types
Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| epithelial cell | 4 studies | 23% ± 7% | |
| GABAergic neuron | 3 studies | 32% ± 5% | |
| glutamatergic neuron | 3 studies | 40% ± 7% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| epithelial cell | 4 studies | 23% ± 7% | |
| GABAergic neuron | 3 studies | 32% ± 5% | |
| glutamatergic neuron | 3 studies | 40% ± 7% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 25% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| esophagus | 100% | 2978.47 | 1445 / 1445 | 100% | 31.70 | 183 / 183 |
| prostate | 100% | 2882.53 | 245 / 245 | 100% | 41.61 | 502 / 502 |
| lung | 100% | 3226.34 | 578 / 578 | 100% | 34.63 | 1154 / 1155 |
| breast | 100% | 3145.51 | 459 / 459 | 100% | 48.61 | 1117 / 1118 |
| liver | 100% | 3827.61 | 226 / 226 | 100% | 70.80 | 405 / 406 |
| ovary | 100% | 3965.74 | 180 / 180 | 100% | 30.04 | 428 / 430 |
| brain | 100% | 3096.57 | 2634 / 2642 | 100% | 50.24 | 703 / 705 |
| thymus | 100% | 3390.95 | 653 / 653 | 99% | 42.99 | 599 / 605 |
| adrenal gland | 100% | 2608.46 | 258 / 258 | 99% | 33.46 | 227 / 230 |
| stomach | 100% | 2322.20 | 359 / 359 | 99% | 33.91 | 282 / 286 |
| pancreas | 100% | 1916.72 | 327 / 328 | 99% | 26.57 | 176 / 178 |
| intestine | 100% | 3893.06 | 966 / 966 | 98% | 30.35 | 517 / 527 |
| kidney | 100% | 1898.22 | 89 / 89 | 98% | 36.43 | 882 / 901 |
| bladder | 100% | 3296.48 | 21 / 21 | 96% | 24.20 | 485 / 504 |
| uterus | 100% | 4545.79 | 170 / 170 | 95% | 23.28 | 434 / 459 |
| skin | 100% | 2965.12 | 1808 / 1809 | 94% | 35.45 | 442 / 472 |
| adipose | 100% | 3439.02 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 4098.49 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| spleen | 100% | 2225.16 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 15.23 | 1 / 1 |
| muscle | 100% | 2515.46 | 802 / 803 | 0% | 0 | 0 / 0 |
| peripheral blood | 96% | 3147.64 | 895 / 929 | 0% | 0 | 0 / 0 |
| heart | 95% | 1726.79 | 818 / 861 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 87% | 14.08 | 39 / 45 |
| eye | 0% | 0 | 0 / 0 | 86% | 22.36 | 69 / 80 |
| lymph node | 0% | 0 | 0 / 0 | 69% | 10.81 | 20 / 29 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0036503 | Biological process | ERAD pathway |
| GO_0000836 | Cellular component | Hrd1p ubiquitin ligase complex |
| GO_0005515 | Molecular function | protein binding |
| Gene name | FAM8A1 |
| Protein name | Family with sequence similarity 8 member A1 (cDNA FLJ52149, highly similar to Protein FAM8A1) Family with sequence similarity 8 member A1 Protein FAM8A1 (Autosomal highly conserved protein) |
| Synonyms | AHCP |
| Description | FUNCTION: Plays a role in the assembly of the HRD1 complex, a complex involved in the ubiquitin-proteasome-dependent process of ER-associated degradation (ERAD). . |
| Accessions | Q9UBU6 ENST00000688732.1 A0A8I5KTS2 ENST00000685064.1 A0A8I5KV35 ENST00000690940.1 ENST00000259963.4 B4DK49 ENST00000691422.1 |
