FAM221A report

Query

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	6 studies	26% ± 12%	Explore
oligodendrocyte	5 studies	26% ± 8%	Explore
epithelial cell	3 studies	28% ± 9%	Explore
retinal pigment epithelial cell	3 studies	41% ± 14%	Explore
GABAergic neuron	3 studies	22% ± 4%	Explore
glutamatergic neuron	3 studies	24% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	4 studies	21% ± 4%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	100%	498.22	245 / 245	97%	5.55	489 / 502
ovary	99%	279.23	179 / 180	98%	4.10	420 / 430
pancreas	100%	761.54	328 / 328	97%	4.02	172 / 178
stomach	100%	716.77	359 / 359	95%	4.87	271 / 286
thymus	100%	691.19	653 / 653	95%	2.93	573 / 605
intestine	100%	396.45	966 / 966	93%	4.76	492 / 527
bladder	100%	363.57	21 / 21	89%	4.19	448 / 504
brain	100%	686.40	2640 / 2642	87%	4.29	615 / 705
lung	99%	405.34	574 / 578	87%	3.41	1001 / 1155
esophagus	100%	379.06	1445 / 1445	83%	5.47	152 / 183
breast	100%	458.36	459 / 459	82%	2.49	921 / 1118
uterus	100%	292.62	170 / 170	81%	2.92	374 / 459
adrenal gland	98%	211.59	254 / 258	81%	2.27	186 / 230
kidney	100%	322.78	89 / 89	71%	1.63	640 / 901
liver	100%	384.21	226 / 226	66%	1.57	266 / 406
skin	72%	227.68	1306 / 1809	42%	0.95	199 / 472
spleen	100%	252.24	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	1.56	1 / 1
adipose	100%	354.67	1201 / 1204	0%	0	0 / 0
blood vessel	100%	330.72	1329 / 1335	0%	0	0 / 0
heart	92%	177.62	790 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	71%	2.53	32 / 45
lymph node	0%	0	0 / 0	66%	1.51	19 / 29
muscle	46%	60.48	370 / 803	0%	0	0 / 0
peripheral blood	28%	85.22	256 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	19%	0.29	15 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0