FAM199X report

Query

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
epithelial cell	5 studies	27% ± 14%	Explore
endothelial cell	3 studies	19% ± 1%	Explore
adipocyte	3 studies	29% ± 4%	Explore
GABAergic neuron	3 studies	27% ± 6%	Explore
astrocyte	3 studies	27% ± 8%	Explore
basal cell	3 studies	16% ± 2%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	31% ± 7%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	100%	4410.49	2642 / 2642	100%	51.90	705 / 705
esophagus	100%	2645.45	1445 / 1445	100%	31.75	183 / 183
prostate	100%	2652.23	245 / 245	100%	27.25	501 / 502
kidney	100%	3174.80	89 / 89	100%	31.88	899 / 901
ovary	100%	3980.46	180 / 180	100%	16.58	429 / 430
breast	100%	3940.24	459 / 459	100%	35.66	1115 / 1118
lung	100%	2837.06	577 / 578	100%	24.57	1153 / 1155
adrenal gland	100%	3234.93	258 / 258	100%	27.88	229 / 230
thymus	100%	3839.16	653 / 653	100%	32.09	602 / 605
pancreas	100%	2354.82	328 / 328	99%	21.77	177 / 178
stomach	100%	2096.38	359 / 359	99%	27.15	284 / 286
bladder	100%	2721.48	21 / 21	99%	25.43	500 / 504
intestine	100%	2769.58	966 / 966	99%	26.41	522 / 527
uterus	100%	3616.33	170 / 170	99%	24.47	454 / 459
skin	100%	2359.96	1806 / 1809	95%	23.55	449 / 472
liver	100%	1366.22	225 / 226	91%	12.46	369 / 406
adipose	100%	4210.64	1204 / 1204	0%	0	0 / 0
blood vessel	100%	3616.93	1335 / 1335	0%	0	0 / 0
muscle	100%	2041.25	803 / 803	0%	0	0 / 0
spleen	100%	2315.38	241 / 241	0%	0	0 / 0
tonsil	0%	0	0 / 0	100%	21.06	45 / 45
ureter	0%	0	0 / 0	100%	11.79	1 / 1
lymph node	0%	0	0 / 0	97%	13.31	28 / 29
heart	96%	1552.29	825 / 861	0%	0	0 / 0
peripheral blood	77%	1298.54	711 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	74%	9.77	59 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0