Name | Number of supported studies | Average coverage | |
---|---|---|---|
pericyte | 20 studies | 25% ± 8% | |
oligodendrocyte | 16 studies | 55% ± 17% | |
endothelial cell | 13 studies | 25% ± 9% | |
smooth muscle cell | 11 studies | 24% ± 7% | |
astrocyte | 11 studies | 30% ± 14% | |
glutamatergic neuron | 9 studies | 42% ± 26% | |
oligodendrocyte precursor cell | 9 studies | 32% ± 13% | |
GABAergic neuron | 8 studies | 39% ± 21% | |
interneuron | 6 studies | 41% ± 24% | |
fibroblast | 5 studies | 23% ± 6% | |
neuron | 4 studies | 36% ± 20% | |
GABAergic interneuron | 3 studies | 25% ± 3% | |
myofibroblast cell | 3 studies | 19% ± 2% | |
capillary endothelial cell | 3 studies | 20% ± 6% | |
endothelial cell of vascular tree | 3 studies | 16% ± 0% | |
muscle cell | 3 studies | 42% ± 32% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 15 studies | 38% ± 21% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1252.56 | 2637 / 2642 | 100% | 16.31 | 703 / 705 |
prostate | 96% | 753.69 | 235 / 245 | 97% | 10.64 | 485 / 502 |
adrenal gland | 95% | 979.62 | 244 / 258 | 88% | 6.29 | 203 / 230 |
thymus | 97% | 571.31 | 631 / 653 | 48% | 0.96 | 290 / 605 |
kidney | 64% | 202.63 | 57 / 89 | 78% | 2.87 | 699 / 901 |
breast | 97% | 864.41 | 447 / 459 | 40% | 0.82 | 449 / 1118 |
esophagus | 93% | 1037.02 | 1340 / 1445 | 40% | 0.77 | 74 / 183 |
lung | 89% | 522.48 | 513 / 578 | 37% | 0.84 | 433 / 1155 |
ovary | 99% | 840.08 | 179 / 180 | 24% | 0.52 | 104 / 430 |
uterus | 98% | 675.19 | 167 / 170 | 17% | 0.47 | 78 / 459 |
intestine | 86% | 597.60 | 830 / 966 | 20% | 0.43 | 106 / 527 |
bladder | 81% | 267.86 | 17 / 21 | 18% | 0.34 | 89 / 504 |
adipose | 98% | 1113.92 | 1182 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 95% | 772.92 | 1273 / 1335 | 0% | 0 | 0 / 0 |
stomach | 55% | 244.38 | 196 / 359 | 39% | 0.97 | 112 / 286 |
muscle | 92% | 774.16 | 740 / 803 | 0% | 0 | 0 / 0 |
skin | 66% | 269.96 | 1191 / 1809 | 13% | 0.29 | 62 / 472 |
pancreas | 21% | 51.09 | 69 / 328 | 52% | 1.48 | 93 / 178 |
heart | 64% | 201.36 | 549 / 861 | 0% | 0 | 0 / 0 |
spleen | 51% | 146.27 | 123 / 241 | 0% | 0 | 0 / 0 |
liver | 2% | 3.24 | 4 / 226 | 29% | 0.53 | 119 / 406 |
tonsil | 0% | 0 | 0 / 0 | 22% | 0.38 | 10 / 45 |
eye | 0% | 0 | 0 / 0 | 1% | 0.03 | 1 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005515 | Molecular function | protein binding |
Gene name | FAM13C |
Protein name | Family with sequence similarity 13 member C Family with sequence similarity 13 member C (cDNA FLJ54631, highly similar to Protein FAM13C1) Protein FAM13C Family with sequence similarity 13 member C (Family with sequence similarity 13, member C1, isoform CRA_g) |
Synonyms | hCG_41127 FAM13C1 |
Description | |
Accessions | ENST00000468840.6 [Q8NE31-4] A0A087X1H9 ENST00000489341.5 ENST00000611933.4 [Q8NE31-3] ENST00000512919.5 ENST00000619059.4 A0A087X0M7 ENST00000621119.4 A0A087X2G4 ENST00000435852.6 ENST00000618427.4 [Q8NE31-5] ENST00000622363.4 ENST00000468696.1 H0YGW3 B7Z2K3 Q8NE31 D6RIX4 A0A087X216 ENST00000422313.6 [Q8NE31-2] ENST00000618804.5 [Q8NE31-1] ENST00000614220.4 |