Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 4 studies | 27% ± 7% | |
GABAergic neuron | 3 studies | 24% ± 5% | |
glutamatergic neuron | 3 studies | 29% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 20% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 100% | 2992.74 | 459 / 459 | 100% | 29.31 | 1118 / 1118 |
esophagus | 100% | 2587.53 | 1445 / 1445 | 100% | 31.51 | 183 / 183 |
lung | 100% | 2907.03 | 578 / 578 | 100% | 32.58 | 1155 / 1155 |
ovary | 100% | 3461.31 | 180 / 180 | 100% | 20.19 | 430 / 430 |
prostate | 100% | 2669.56 | 245 / 245 | 100% | 28.57 | 502 / 502 |
intestine | 100% | 2726.40 | 966 / 966 | 100% | 23.52 | 526 / 527 |
uterus | 100% | 3418.71 | 170 / 170 | 100% | 32.10 | 458 / 459 |
brain | 100% | 2673.70 | 2633 / 2642 | 100% | 30.02 | 705 / 705 |
stomach | 100% | 2196.19 | 359 / 359 | 100% | 22.42 | 285 / 286 |
bladder | 100% | 2789.90 | 21 / 21 | 100% | 26.54 | 502 / 504 |
skin | 100% | 4777.21 | 1809 / 1809 | 100% | 40.01 | 470 / 472 |
thymus | 100% | 2758.98 | 653 / 653 | 99% | 22.46 | 601 / 605 |
pancreas | 99% | 1458.57 | 326 / 328 | 99% | 20.29 | 176 / 178 |
kidney | 100% | 2136.93 | 89 / 89 | 98% | 22.05 | 883 / 901 |
liver | 100% | 1777.73 | 226 / 226 | 94% | 12.74 | 382 / 406 |
adrenal gland | 100% | 2767.64 | 258 / 258 | 93% | 16.80 | 214 / 230 |
adipose | 100% | 2994.58 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3096.91 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 14.75 | 29 / 29 |
muscle | 100% | 2995.13 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 2539.07 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 35.22 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 9.55 | 1 / 1 |
heart | 98% | 2309.62 | 846 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 98% | 18.08 | 78 / 80 |
peripheral blood | 64% | 1334.34 | 599 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0071816 | Biological process | tail-anchored membrane protein insertion into ER membrane |
GO_0045050 | Biological process | protein insertion into ER membrane by stop-transfer membrane-anchor sequence |
GO_0032991 | Cellular component | protein-containing complex |
GO_0072546 | Cellular component | EMC complex |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0032977 | Molecular function | membrane insertase activity |
GO_0005515 | Molecular function | protein binding |
Gene name | EMC1 |
Protein name | ER membrane protein complex subunit 1 |
Synonyms | KIAA0090 PSEC0263 |
Description | FUNCTION: Part of the endoplasmic reticulum membrane protein complex (EMC) that enables the energy-independent insertion into endoplasmic reticulum membranes of newly synthesized membrane proteins . Preferentially accommodates proteins with transmembrane domains that are weakly hydrophobic or contain destabilizing features such as charged and aromatic residues . Involved in the cotranslational insertion of multi-pass membrane proteins in which stop-transfer membrane-anchor sequences become ER membrane spanning helices . It is also required for the post-translational insertion of tail-anchored/TA proteins in endoplasmic reticulum membranes . By mediating the proper cotranslational insertion of N-terminal transmembrane domains in an N-exo topology, with translocated N-terminus in the lumen of the ER, controls the topology of multi-pass membrane proteins like the G protein-coupled receptors . By regulating the insertion of various proteins in membranes, it is indirectly involved in many cellular processes (Probable). . |
Accessions | ENST00000488681.2 A0A8I5KW55 ENST00000375208.7 [Q8N766-4] ENST00000690823.1 ENST00000690732.1 ENST00000688332.1 ENST00000688219.1 ENST00000475079.1 ENST00000486405.2 H7C5A2 A0A8I5KWE3 A0A8I5KTE8 ENST00000685594.1 H7C4E3 ENST00000692207.1 A0A8I5KSM5 ENST00000486238.1 A0A8I5KQA0 A0A8I5KRL9 A0A8I5KXE1 Q5TG59 ENST00000477853.6 [Q8N766-1] ENST00000688667.1 A0A8I5QKP5 ENST00000375199.7 [Q8N766-2] ENST00000685099.1 ENST00000688538.1 A0A8I5KWP6 ENST00000494770.7 Q8N766 |