Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 6 studies | 35% ± 20% | |
endothelial cell | 5 studies | 19% ± 3% | |
astrocyte | 5 studies | 29% ± 14% | |
glutamatergic neuron | 5 studies | 45% ± 22% | |
neuron | 5 studies | 35% ± 14% | |
epithelial cell | 4 studies | 28% ± 4% | |
retina horizontal cell | 4 studies | 28% ± 7% | |
interneuron | 4 studies | 39% ± 22% | |
oligodendrocyte precursor cell | 3 studies | 26% ± 7% | |
dendritic cell | 3 studies | 24% ± 5% | |
transit amplifying cell | 3 studies | 28% ± 15% | |
oligodendrocyte | 3 studies | 24% ± 8% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 5 studies | 38% ± 15% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 1848.05 | 2642 / 2642 | 100% | 26.68 | 705 / 705 |
prostate | 100% | 843.58 | 245 / 245 | 100% | 16.00 | 502 / 502 |
stomach | 100% | 611.52 | 359 / 359 | 100% | 17.71 | 286 / 286 |
thymus | 100% | 1433.67 | 653 / 653 | 100% | 21.71 | 605 / 605 |
breast | 100% | 732.04 | 459 / 459 | 100% | 16.27 | 1117 / 1118 |
bladder | 100% | 805.67 | 21 / 21 | 100% | 20.35 | 503 / 504 |
uterus | 100% | 760.86 | 170 / 170 | 100% | 20.35 | 458 / 459 |
skin | 100% | 1169.05 | 1808 / 1809 | 100% | 16.87 | 471 / 472 |
intestine | 100% | 775.21 | 965 / 966 | 100% | 20.54 | 526 / 527 |
esophagus | 100% | 895.77 | 1439 / 1445 | 100% | 14.79 | 183 / 183 |
kidney | 100% | 1336.37 | 89 / 89 | 100% | 13.53 | 897 / 901 |
lung | 99% | 839.75 | 573 / 578 | 100% | 19.39 | 1155 / 1155 |
adrenal gland | 100% | 1192.67 | 258 / 258 | 99% | 17.71 | 227 / 230 |
pancreas | 98% | 476.46 | 323 / 328 | 100% | 14.93 | 178 / 178 |
ovary | 98% | 557.26 | 177 / 180 | 100% | 18.64 | 430 / 430 |
liver | 100% | 737.13 | 225 / 226 | 98% | 10.19 | 399 / 406 |
eye | 0% | 0 | 0 / 0 | 100% | 14.74 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 26.01 | 29 / 29 |
spleen | 100% | 1210.86 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 18.51 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 12.61 | 1 / 1 |
adipose | 100% | 671.12 | 1199 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 98% | 567.23 | 1306 / 1335 | 0% | 0 | 0 / 0 |
muscle | 98% | 567.75 | 785 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 96% | 1077.73 | 892 / 929 | 0% | 0 | 0 / 0 |
heart | 95% | 570.60 | 816 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_1905281 | Biological process | positive regulation of retrograde transport, endosome to Golgi |
GO_2001137 | Biological process | positive regulation of endocytic recycling |
GO_0016567 | Biological process | protein ubiquitination |
GO_0050796 | Biological process | regulation of insulin secretion |
GO_0032456 | Biological process | endocytic recycling |
GO_0005802 | Cellular component | trans-Golgi network |
GO_0000938 | Cellular component | GARP complex |
GO_1990745 | Cellular component | EARP complex |
GO_0005515 | Molecular function | protein binding |
Gene name | EIPR1 |
Protein name | EARP complex and GARP complex interacting protein 1 EARP and GARP complex-interacting protein 1 (Endosome-associated recycling protein-interacting protein) (Golgi-associated retrograde protein-interacting protein) (Tumor-suppressing STF cDNA 1 protein) (Tumor-suppressing subchromosomal transferable fragment candidate gene 1 protein) |
Synonyms | TSSC1 |
Description | FUNCTION: Acts as a component of endosomal retrieval machinery that is involved in protein transport from early endosomes to either recycling endosomes or the trans-Golgi network . Mediates the recruitment of Golgi-associated retrograde protein (GARP) complex to the trans-Golgi network and controls early endosome-to-Golgi transport of internalized protein. Promotes the recycling of internalized transferrin receptor (TFRC) to the plasma membrane through interaction with endosome-associated recycling protein (EARP) complex . Controls proper insulin distribution and secretion, and retention of cargo in mature dense core vesicles (By similarity). Required for the stability of the endosome-associated retrograde protein (EARP) complex subunits and for proper localization and association of EARP with membranes (By similarity). . |
Accessions | Q53HC9 ENST00000382125.9 ENST00000444776.1 F8WB12 C9J0U9 F8WDS8 ENST00000455162.5 D3YTH5 ENST00000435721.5 ENST00000406835.6 C9JVR6 ENST00000398659.8 ENST00000443925.6 ENST00000441271.1 A8MUM1 F8WDX0 |