Name | Number of supported studies | Average coverage | |
---|---|---|---|
pericyte | 18 studies | 37% ± 14% | |
smooth muscle cell | 17 studies | 30% ± 9% | |
oligodendrocyte | 16 studies | 43% ± 14% | |
astrocyte | 9 studies | 28% ± 11% | |
kidney loop of Henle epithelial cell | 7 studies | 50% ± 10% | |
renal alpha-intercalated cell | 6 studies | 53% ± 15% | |
endothelial cell | 5 studies | 31% ± 9% | |
kidney distal convoluted tubule epithelial cell | 4 studies | 43% ± 17% | |
fibroblast | 4 studies | 32% ± 18% | |
luminal hormone-sensing cell of mammary gland | 4 studies | 73% ± 10% | |
connective tissue cell | 4 studies | 30% ± 10% | |
muscle cell | 3 studies | 35% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
breast | 99% | 9651.62 | 453 / 459 | 95% | 405.67 | 1065 / 1118 |
brain | 89% | 7337.03 | 2350 / 2642 | 93% | 157.57 | 656 / 705 |
kidney | 100% | 9979.03 | 89 / 89 | 76% | 67.05 | 684 / 901 |
ovary | 100% | 5468.53 | 180 / 180 | 33% | 19.40 | 144 / 430 |
thymus | 92% | 2558.14 | 603 / 653 | 31% | 14.96 | 187 / 605 |
uterus | 99% | 5824.84 | 169 / 170 | 21% | 15.76 | 95 / 459 |
eye | 0% | 0 | 0 / 0 | 100% | 837.48 | 80 / 80 |
blood vessel | 100% | 19251.13 | 1334 / 1335 | 0% | 0 | 0 / 0 |
spleen | 99% | 3813.41 | 239 / 241 | 0% | 0 | 0 / 0 |
adipose | 99% | 5728.59 | 1189 / 1204 | 0% | 0 | 0 / 0 |
prostate | 74% | 1779.89 | 181 / 245 | 8% | 3.33 | 40 / 502 |
liver | 57% | 1394.85 | 129 / 226 | 23% | 14.92 | 92 / 406 |
bladder | 71% | 1470.95 | 15 / 21 | 8% | 6.82 | 40 / 504 |
skin | 43% | 1192.17 | 777 / 1809 | 31% | 35.40 | 147 / 472 |
muscle | 61% | 1174.90 | 487 / 803 | 0% | 0 | 0 / 0 |
heart | 61% | 1182.93 | 522 / 861 | 0% | 0 | 0 / 0 |
esophagus | 52% | 1288.49 | 746 / 1445 | 4% | 3.21 | 8 / 183 |
lung | 38% | 711.34 | 217 / 578 | 11% | 9.56 | 128 / 1155 |
intestine | 37% | 802.43 | 354 / 966 | 1% | 0.36 | 5 / 527 |
stomach | 31% | 722.27 | 113 / 359 | 4% | 2.34 | 12 / 286 |
adrenal gland | 2% | 34.09 | 5 / 258 | 13% | 7.36 | 29 / 230 |
tonsil | 0% | 0 | 0 / 0 | 4% | 1.57 | 2 / 45 |
pancreas | 0% | 0 | 0 / 328 | 3% | 2.16 | 5 / 178 |
peripheral blood | 0% | 1.27 | 1 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_1900069 | Biological process | regulation of cellular hyperosmotic salinity response |
GO_0031175 | Biological process | neuron projection development |
GO_0005743 | Cellular component | mitochondrial inner membrane |
GO_0005739 | Cellular component | mitochondrion |
GO_0061891 | Molecular function | calcium ion sensor activity |
GO_0005509 | Molecular function | calcium ion binding |
Gene name | EFHD1 |
Protein name | EF-hand domain family member D1 EF-hand domain-containing protein D1 (EF-hand domain-containing protein 1) (Swiprosin-2) |
Synonyms | PP1187 DKFZp781H0842 PP3051 SWS2 |
Description | FUNCTION: Acts as a calcium sensor for mitochondrial flash (mitoflash) activation, an event characterized by stochastic bursts of superoxide production . May play a role in neuronal differentiation (By similarity). . |
Accessions | ENST00000264059.8 [Q9BUP0-1] Q8WYH2 ENST00000409708.5 ENST00000442845.1 ENST00000427698.1 C9JTV4 H7C0I0 ENST00000410095.5 Q9BUP0 ENST00000409613.5 [Q9BUP0-2] |