EFCC1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell of lymphatic vessel	4 studies	24% ± 6%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	100%	695.04	245 / 245	100%	8.88	500 / 502
intestine	100%	849.80	966 / 966	97%	5.40	512 / 527
stomach	100%	559.85	359 / 359	93%	4.93	267 / 286
thymus	100%	680.69	652 / 653	90%	4.16	543 / 605
breast	100%	532.79	457 / 459	85%	9.45	945 / 1118
lung	100%	1652.81	577 / 578	81%	3.61	937 / 1155
bladder	95%	587.00	20 / 21	79%	3.39	399 / 504
esophagus	96%	598.65	1390 / 1445	77%	3.42	140 / 183
ovary	99%	1099.44	178 / 180	69%	3.08	298 / 430
kidney	97%	338.00	86 / 89	67%	2.60	608 / 901
uterus	99%	435.22	168 / 170	60%	2.42	276 / 459
pancreas	48%	69.09	158 / 328	99%	5.05	176 / 178
brain	60%	130.02	1583 / 2642	67%	1.70	469 / 705
adrenal gland	64%	109.15	164 / 258	55%	1.57	126 / 230
skin	71%	215.89	1292 / 1809	36%	1.29	171 / 472
spleen	100%	927.51	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	2.06	1 / 1
adipose	99%	428.39	1191 / 1204	0%	0	0 / 0
heart	86%	254.75	739 / 861	0%	0	0 / 0
liver	27%	38.30	61 / 226	51%	1.04	207 / 406
muscle	58%	82.19	469 / 803	0%	0	0 / 0
eye	0%	0	0 / 0	51%	1.12	41 / 80
blood vessel	37%	81.25	494 / 1335	0%	0	0 / 0
tonsil	0%	0	0 / 0	36%	0.55	16 / 45
lymph node	0%	0	0 / 0	28%	0.51	8 / 29
peripheral blood	0%	0.44	3 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0