EFCAB12 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	11 studies	28% ± 7%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	93%	832.09	228 / 245	98%	5.21	491 / 502
kidney	94%	133.47	84 / 89	57%	1.66	512 / 901
ovary	92%	166.11	166 / 180	49%	1.64	210 / 430
thymus	99%	229.78	645 / 653	36%	0.69	215 / 605
liver	90%	153.58	203 / 226	44%	1.44	178 / 406
breast	74%	52.31	338 / 459	52%	1.56	580 / 1118
lung	93%	285.04	536 / 578	16%	0.44	183 / 1155
brain	91%	215.56	2395 / 2642	18%	0.63	126 / 705
spleen	98%	102.73	237 / 241	0%	0	0 / 0
adrenal gland	92%	73.75	238 / 258	4%	0.10	10 / 230
peripheral blood	89%	145.81	830 / 929	0%	0	0 / 0
pancreas	68%	50.96	224 / 328	14%	0.28	25 / 178
uterus	61%	113.19	104 / 170	17%	0.56	78 / 459
stomach	74%	93.25	264 / 359	2%	0.06	6 / 286
adipose	59%	38.02	712 / 1204	0%	0	0 / 0
heart	30%	17.96	259 / 861	0%	0	0 / 0
intestine	25%	20.89	245 / 966	3%	0.06	16 / 527
lymph node	0%	0	0 / 0	21%	0.45	6 / 29
esophagus	4%	1.80	58 / 1445	5%	0.10	10 / 183
bladder	5%	3.05	1 / 21	2%	0.04	12 / 504
skin	5%	2.15	90 / 1809	2%	0.03	8 / 472
tonsil	0%	0	0 / 0	7%	0.18	3 / 45
blood vessel	4%	2.23	55 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	3%	0.03	2 / 80
muscle	0%	0.21	4 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1