Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| GABAergic neuron | 4 studies | 26% ± 8% | |
| astrocyte | 4 studies | 23% ± 4% | |
| glutamatergic neuron | 4 studies | 32% ± 12% | |
| epithelial cell | 3 studies | 17% ± 1% | |
| oligodendrocyte | 3 studies | 18% ± 2% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 4 studies | 27% ± 7% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| ovary | 100% | 2104.13 | 180 / 180 | 100% | 22.79 | 430 / 430 |
| prostate | 100% | 2369.81 | 245 / 245 | 100% | 26.52 | 502 / 502 |
| skin | 100% | 2026.46 | 1809 / 1809 | 100% | 29.06 | 472 / 472 |
| brain | 100% | 1452.29 | 2640 / 2642 | 100% | 25.96 | 705 / 705 |
| thymus | 100% | 2168.93 | 653 / 653 | 100% | 21.07 | 603 / 605 |
| breast | 100% | 1634.07 | 459 / 459 | 100% | 24.72 | 1114 / 1118 |
| uterus | 100% | 2138.34 | 170 / 170 | 100% | 24.23 | 457 / 459 |
| esophagus | 100% | 1756.87 | 1445 / 1445 | 99% | 19.66 | 182 / 183 |
| bladder | 100% | 1835.48 | 21 / 21 | 99% | 19.34 | 501 / 504 |
| lung | 100% | 1464.78 | 577 / 578 | 99% | 20.59 | 1149 / 1155 |
| intestine | 100% | 1794.20 | 966 / 966 | 99% | 18.16 | 523 / 527 |
| kidney | 100% | 1452.54 | 89 / 89 | 99% | 13.49 | 892 / 901 |
| stomach | 100% | 1342.93 | 359 / 359 | 99% | 17.13 | 283 / 286 |
| pancreas | 100% | 876.42 | 327 / 328 | 99% | 16.48 | 176 / 178 |
| liver | 100% | 871.46 | 226 / 226 | 96% | 11.36 | 390 / 406 |
| adrenal gland | 100% | 1216.24 | 258 / 258 | 94% | 12.44 | 217 / 230 |
| adipose | 100% | 1451.74 | 1204 / 1204 | 0% | 0 | 0 / 0 |
| blood vessel | 100% | 1474.52 | 1335 / 1335 | 0% | 0 | 0 / 0 |
| eye | 0% | 0 | 0 / 0 | 100% | 20.63 | 80 / 80 |
| lymph node | 0% | 0 | 0 / 0 | 100% | 23.75 | 29 / 29 |
| spleen | 100% | 2000.68 | 241 / 241 | 0% | 0 | 0 / 0 |
| tonsil | 0% | 0 | 0 / 0 | 100% | 20.64 | 45 / 45 |
| ureter | 0% | 0 | 0 / 0 | 100% | 12.15 | 1 / 1 |
| muscle | 100% | 1080.96 | 802 / 803 | 0% | 0 | 0 / 0 |
| heart | 99% | 887.66 | 853 / 861 | 0% | 0 | 0 / 0 |
| peripheral blood | 92% | 1326.42 | 852 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0033962 | Biological process | P-body assembly |
| GO_0031087 | Biological process | deadenylation-independent decapping of nuclear-transcribed mRNA |
| GO_0000932 | Cellular component | P-body |
| GO_0005829 | Cellular component | cytosol |
| GO_0016020 | Cellular component | membrane |
| GO_0036464 | Cellular component | cytoplasmic ribonucleoprotein granule |
| GO_0042802 | Molecular function | identical protein binding |
| GO_0005515 | Molecular function | protein binding |
| GO_0003729 | Molecular function | mRNA binding |
| Gene name | EDC3 |
| Protein name | Enhancer of mRNA-decapping protein 3 (LSM16 homolog) (YjeF N-terminal domain-containing protein 2) (YjeF_N2) (hYjeF_N2) (YjeF domain-containing protein 1) YjeF domain-containing protein 1 Enhancer of mRNA decapping 3 |
| Synonyms | LSM16 YJDC YJEFN2 PP844 |
| Description | FUNCTION: Binds single-stranded RNA. Involved in the process of mRNA degradation and in the positive regulation of mRNA decapping. May play a role in spermiogenesis and oogenesis. . |
| Accessions | ENST00000563009.5 ENST00000566219.1 H3BTF8 ENST00000567813.1 ENST00000315127.9 H3BSQ0 ENST00000566828.5 ENST00000562974.1 ENST00000569561.5 ENST00000562174.5 ENST00000563292.1 H3BQA1 ENST00000426797.7 H3BQ37 ENST00000566119.5 H3BMB8 H3BNJ7 H3BTH0 ENST00000566243.5 ENST00000565602.5 H3BQP5 Q96F86 ENST00000568176.5 H3BPN4 H3BU87 H3BPW9 ENST00000570138.5 H3BTD6 ENST00000647659.1 |
