Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 8 studies | 25% ± 8% | |
club cell | 5 studies | 20% ± 7% | |
respiratory goblet cell | 5 studies | 31% ± 15% | |
epithelial cell | 5 studies | 25% ± 10% | |
secretory cell | 4 studies | 22% ± 5% | |
squamous epithelial cell | 4 studies | 46% ± 23% | |
basal cell | 4 studies | 25% ± 9% | |
goblet cell | 3 studies | 20% ± 2% | |
plasmacytoid dendritic cell | 3 studies | 24% ± 7% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
lung | 3 studies | 21% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
uterus | 100% | 1130.14 | 170 / 170 | 100% | 34.64 | 459 / 459 |
esophagus | 100% | 2500.17 | 1444 / 1445 | 100% | 34.54 | 183 / 183 |
intestine | 100% | 1348.50 | 964 / 966 | 100% | 38.90 | 526 / 527 |
ovary | 100% | 827.32 | 180 / 180 | 99% | 15.62 | 427 / 430 |
bladder | 100% | 1269.95 | 21 / 21 | 99% | 31.17 | 498 / 504 |
prostate | 100% | 1801.39 | 245 / 245 | 99% | 14.60 | 495 / 502 |
stomach | 100% | 1081.25 | 359 / 359 | 99% | 34.32 | 282 / 286 |
lung | 99% | 1216.16 | 575 / 578 | 99% | 27.80 | 1142 / 1155 |
skin | 100% | 2277.50 | 1809 / 1809 | 98% | 14.72 | 464 / 472 |
breast | 100% | 1112.53 | 459 / 459 | 97% | 14.87 | 1081 / 1118 |
pancreas | 97% | 654.46 | 319 / 328 | 98% | 23.33 | 175 / 178 |
thymus | 100% | 855.06 | 650 / 653 | 95% | 10.59 | 572 / 605 |
kidney | 97% | 608.81 | 86 / 89 | 86% | 8.22 | 774 / 901 |
liver | 97% | 586.28 | 219 / 226 | 70% | 6.48 | 283 / 406 |
adrenal gland | 97% | 573.98 | 250 / 258 | 38% | 3.21 | 88 / 230 |
brain | 54% | 213.87 | 1421 / 2642 | 55% | 4.54 | 385 / 705 |
lymph node | 0% | 0 | 0 / 0 | 100% | 30.44 | 29 / 29 |
spleen | 100% | 1691.52 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 53.88 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 14.23 | 1 / 1 |
adipose | 100% | 1032.62 | 1200 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 788.61 | 1318 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 1815.64 | 917 / 929 | 0% | 0 | 0 / 0 |
muscle | 96% | 638.18 | 770 / 803 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 95% | 8.15 | 76 / 80 |
heart | 86% | 462.27 | 740 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0016567 | Biological process | protein ubiquitination |
GO_0007219 | Biological process | Notch signaling pathway |
GO_0005654 | Cellular component | nucleoplasm |
GO_0031965 | Cellular component | nuclear membrane |
GO_0005737 | Cellular component | cytoplasm |
GO_0061630 | Molecular function | ubiquitin protein ligase activity |
GO_0005515 | Molecular function | protein binding |
GO_0008270 | Molecular function | zinc ion binding |
Gene name | DTX2 |
Protein name | Deltex 2 transcript E Deltex E3 ubiquitin ligase 2 Probable E3 ubiquitin-protein ligase DTX2 Probable E3 ubiquitin-protein ligase DTX2 (EC 2.3.2.27) (Protein deltex-2) (Deltex2) (hDTX2) (RING finger protein 58) (RING-type E3 ubiquitin transferase DTX2) Deltex 2 transcript I E3 ubiquitin-protein ligase (EC 2.3.2.27) |
Synonyms | RNF58 KIAA1528 |
Description | FUNCTION: Regulator of Notch signaling, a signaling pathway involved in cell-cell communications that regulates a broad spectrum of cell-fate determinations. Probably acts both as a positive and negative regulator of Notch, depending on the developmental and cell context. Mediates the antineural activity of Notch, possibly by inhibiting the transcriptional activation mediated by MATCH1. Functions as a ubiquitin ligase protein in vitro, suggesting that it may regulate the Notch pathway via some ubiquitin ligase activity. |
Accessions | ENST00000435251.2 ENST00000631991.1 ENST00000456590.5 Q4FEB4 ENST00000633541.1 ENST00000435861.1 E7ET89 ENST00000442516.1 ENST00000446820.6 [Q86UW9-2] Q6P2H0 ENST00000631700.1 C9JS11 C9JY61 ENST00000425780.5 ENST00000423646.5 ENST00000413936.6 [Q86UW9-1] C9JVC8 C9IYX1 C9JF39 ENST00000631645.1 ENST00000438930.5 ENST00000634040.1 A0A0J9YXJ6 ENST00000430490.7 [Q86UW9-1] C9JLU8 ENST00000446600.5 ENST00000457529.5 C9JEH4 Q75MM6 ENST00000451769.5 Q86UW9 Q4FEB2 ENST00000324432.9 [Q86UW9-1] C9JII1 H7C3B8 ENST00000632696.1 ENST00000429179.1 |