Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 9 studies | 36% ± 19% | |
astrocyte | 8 studies | 31% ± 13% | |
endothelial cell | 6 studies | 26% ± 10% | |
GABAergic neuron | 5 studies | 29% ± 6% | |
oligodendrocyte | 5 studies | 27% ± 5% | |
microglial cell | 3 studies | 18% ± 2% | |
ciliated cell | 3 studies | 23% ± 4% | |
type I pneumocyte | 3 studies | 33% ± 5% | |
type II pneumocyte | 3 studies | 20% ± 2% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 9 studies | 28% ± 14% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
lung | 100% | 2517.43 | 578 / 578 | 100% | 43.41 | 1152 / 1155 |
brain | 100% | 2167.01 | 2634 / 2642 | 100% | 52.11 | 704 / 705 |
stomach | 100% | 1025.38 | 359 / 359 | 99% | 30.33 | 284 / 286 |
intestine | 100% | 1435.75 | 965 / 966 | 99% | 27.55 | 522 / 527 |
esophagus | 99% | 1107.57 | 1434 / 1445 | 99% | 34.09 | 181 / 183 |
adrenal gland | 100% | 1902.60 | 258 / 258 | 96% | 27.18 | 220 / 230 |
uterus | 100% | 2278.98 | 170 / 170 | 96% | 19.29 | 439 / 459 |
kidney | 100% | 926.29 | 89 / 89 | 95% | 21.52 | 860 / 901 |
thymus | 100% | 1309.62 | 652 / 653 | 95% | 19.31 | 576 / 605 |
bladder | 100% | 1765.14 | 21 / 21 | 95% | 21.04 | 478 / 504 |
pancreas | 95% | 627.38 | 313 / 328 | 98% | 25.23 | 175 / 178 |
skin | 98% | 1731.03 | 1779 / 1809 | 95% | 32.81 | 447 / 472 |
breast | 100% | 1520.01 | 459 / 459 | 92% | 15.95 | 1034 / 1118 |
liver | 100% | 1435.30 | 226 / 226 | 87% | 12.53 | 355 / 406 |
ovary | 100% | 1296.42 | 180 / 180 | 87% | 10.62 | 374 / 430 |
prostate | 99% | 1270.97 | 243 / 245 | 74% | 7.15 | 373 / 502 |
adipose | 100% | 1883.61 | 1204 / 1204 | 0% | 0 | 0 / 0 |
spleen | 100% | 1849.95 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 18.85 | 45 / 45 |
blood vessel | 100% | 1781.84 | 1334 / 1335 | 0% | 0 | 0 / 0 |
heart | 99% | 1617.23 | 853 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 86% | 10.04 | 25 / 29 |
muscle | 59% | 280.46 | 477 / 803 | 0% | 0 | 0 / 0 |
peripheral blood | 53% | 360.51 | 490 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 38% | 3.41 | 30 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006486 | Biological process | protein glycosylation |
GO_0018406 | Biological process | protein C-linked glycosylation via 2'-alpha-mannosyl-L-tryptophan |
GO_0005637 | Cellular component | nuclear inner membrane |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0000030 | Molecular function | mannosyltransferase activity |
Gene name | DPY19L1 |
Protein name | Dpy-19 like C-mannosyltransferase 1 Protein C-mannosyl-transferase DPY19L1 (EC 2.4.1.-) (Dpy-19-like protein 1) (Protein dpy-19 homolog 1) |
Synonyms | KIAA0877 GA0500 |
Description | FUNCTION: C-mannosyltransferase that mediates the C-mannosylation tryptophan residues on target proteins. The reaction occurs on the luminal side of the endoplasmic reticulum and involves the transfer of a mannose unit from a dolichylphosphate mannose (Dol-P-Man) donor to an acceptor protein containing a WxxW consensus sequence (By similarity). C-mannosylates the first two tryptophans in the WxxWxxWxxC motif in thrombospondin (TSP) type-1 of UNC5A (By similarity). Regulates neurite extension during development (By similarity). . |
Accessions | A0A8I5KUQ5 H7C3M5 ENST00000638088.2 H7C1I8 ENST00000685246.1 ENST00000446375.1 ENST00000690666.1 A0A8I5KSD1 A0A8J9BZN9 ENST00000690503.1 ENST00000612226.2 A0A8I5KPK9 ENST00000310974.8 [Q2PZI1-1] A0A1B0GW05 Q2PZI1 ENST00000428054.1 |