Name | Number of supported studies | Average coverage | |
---|---|---|---|
classical monocyte | 6 studies | 23% ± 8% | |
non-classical monocyte | 6 studies | 26% ± 10% | |
endothelial cell | 6 studies | 21% ± 3% | |
epithelial cell | 5 studies | 31% ± 13% | |
plasmacytoid dendritic cell | 4 studies | 21% ± 4% | |
myeloid cell | 3 studies | 21% ± 5% | |
fibroblast | 3 studies | 20% ± 3% | |
ciliated cell | 3 studies | 23% ± 3% | |
dendritic cell | 3 studies | 33% ± 15% | |
basal cell | 3 studies | 22% ± 5% | |
oligodendrocyte | 3 studies | 17% ± 1% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 3152.63 | 1445 / 1445 | 100% | 28.49 | 183 / 183 |
intestine | 100% | 3169.93 | 966 / 966 | 100% | 32.12 | 527 / 527 |
kidney | 100% | 3110.11 | 89 / 89 | 100% | 33.44 | 901 / 901 |
lung | 100% | 3261.91 | 578 / 578 | 100% | 31.26 | 1155 / 1155 |
ovary | 100% | 3376.64 | 180 / 180 | 100% | 34.78 | 430 / 430 |
pancreas | 100% | 2245.61 | 328 / 328 | 100% | 37.04 | 178 / 178 |
prostate | 100% | 3708.59 | 245 / 245 | 100% | 44.96 | 502 / 502 |
skin | 100% | 3973.91 | 1809 / 1809 | 100% | 32.43 | 472 / 472 |
stomach | 100% | 2776.25 | 359 / 359 | 100% | 29.92 | 286 / 286 |
thymus | 100% | 3722.00 | 653 / 653 | 100% | 44.49 | 605 / 605 |
breast | 100% | 3814.02 | 459 / 459 | 100% | 43.66 | 1117 / 1118 |
brain | 100% | 2297.16 | 2637 / 2642 | 100% | 32.24 | 705 / 705 |
uterus | 100% | 3421.70 | 170 / 170 | 100% | 32.25 | 458 / 459 |
liver | 100% | 2123.66 | 226 / 226 | 100% | 25.63 | 405 / 406 |
bladder | 100% | 3104.57 | 21 / 21 | 100% | 32.02 | 502 / 504 |
adrenal gland | 100% | 4208.37 | 258 / 258 | 100% | 42.54 | 229 / 230 |
adipose | 100% | 3542.82 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 3192.87 | 1335 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 54.20 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 31.56 | 29 / 29 |
muscle | 100% | 3208.05 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 3633.65 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 30.95 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 23.47 | 1 / 1 |
heart | 99% | 2423.54 | 855 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 99% | 2672.69 | 917 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0071218 | Biological process | cellular response to misfolded protein |
GO_0051085 | Biological process | chaperone cofactor-dependent protein refolding |
GO_0036503 | Biological process | ERAD pathway |
GO_0065003 | Biological process | protein-containing complex assembly |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0031965 | Cellular component | nuclear membrane |
GO_0016020 | Cellular component | membrane |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0030544 | Molecular function | Hsp70 protein binding |
Gene name | DNAJB12 |
Protein name | DnaJ homolog subfamily B member 12 DnaJ (Hsp40) homolog, subfamily B, member 12, isoform CRA_c (DnaJ heat shock protein family (Hsp40) member B12) DnaJ heat shock protein family (Hsp40) member B12 |
Synonyms | hCG_2024622 |
Description | FUNCTION: Acts as a co-chaperone with HSPA8/Hsc70; required to promote protein folding and trafficking, prevent aggregation of client proteins, and promote unfolded proteins to endoplasmic reticulum-associated degradation (ERAD) pathway . Acts by determining HSPA8/Hsc70's ATPase and polypeptide-binding activities . Can also act independently of HSPA8/Hsc70: together with DNAJB14, acts as a chaperone that promotes maturation of potassium channels KCND2 and KCNH2 by stabilizing nascent channel subunits and assembling them into tetramers . While stabilization of nascent channel proteins is dependent on HSPA8/Hsc70, the process of oligomerization of channel subunits is independent of HSPA8/Hsc70 . When overexpressed, forms membranous structures together with DNAJB14 and HSPA8/Hsc70 within the nucleus; the role of these structures, named DJANGOs, is still unclear . .; FUNCTION: (Microbial infection) In case of infection by polyomavirus, involved in the virus endoplasmic reticulum membrane penetration and infection . . |
Accessions | ENST00000463786.2 J3KPS0 ENST00000338820.7 ENST00000461919.5 ENST00000444643.8 [Q9NXW2-1] ENST00000394903.6 V9GYN7 Q9NXW2 V9GY70 |