Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 9 studies | 31% ± 11% | |
endothelial cell | 8 studies | 24% ± 7% | |
glutamatergic neuron | 8 studies | 35% ± 20% | |
type I pneumocyte | 7 studies | 26% ± 5% | |
GABAergic neuron | 7 studies | 34% ± 19% | |
astrocyte | 7 studies | 25% ± 9% | |
oligodendrocyte | 6 studies | 23% ± 4% | |
epithelial cell | 5 studies | 33% ± 13% | |
neuron | 4 studies | 30% ± 7% | |
type II pneumocyte | 4 studies | 19% ± 5% | |
goblet cell | 4 studies | 26% ± 13% | |
interneuron | 4 studies | 37% ± 21% | |
microglial cell | 3 studies | 22% ± 2% | |
fibroblast | 3 studies | 19% ± 3% | |
macrophage | 3 studies | 19% ± 2% | |
transit amplifying cell | 3 studies | 28% ± 16% | |
granule cell | 3 studies | 19% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 7912.96 | 1445 / 1445 | 100% | 83.33 | 183 / 183 |
pancreas | 100% | 5371.68 | 328 / 328 | 100% | 89.94 | 178 / 178 |
thymus | 100% | 9894.31 | 653 / 653 | 100% | 126.14 | 605 / 605 |
brain | 100% | 8367.02 | 2640 / 2642 | 100% | 182.33 | 705 / 705 |
prostate | 100% | 8262.44 | 245 / 245 | 100% | 127.04 | 501 / 502 |
stomach | 100% | 5471.03 | 359 / 359 | 100% | 77.19 | 285 / 286 |
breast | 100% | 6529.34 | 459 / 459 | 100% | 92.53 | 1114 / 1118 |
skin | 100% | 11043.07 | 1809 / 1809 | 100% | 87.23 | 470 / 472 |
kidney | 100% | 6255.98 | 89 / 89 | 100% | 85.69 | 897 / 901 |
uterus | 100% | 7676.45 | 170 / 170 | 99% | 93.20 | 456 / 459 |
lung | 100% | 6921.85 | 577 / 578 | 99% | 98.88 | 1149 / 1155 |
bladder | 100% | 7214.29 | 21 / 21 | 99% | 90.14 | 500 / 504 |
intestine | 100% | 7210.26 | 966 / 966 | 99% | 82.33 | 522 / 527 |
ovary | 100% | 7963.77 | 180 / 180 | 98% | 65.05 | 423 / 430 |
liver | 100% | 3540.40 | 225 / 226 | 98% | 58.43 | 396 / 406 |
adrenal gland | 100% | 6199.53 | 258 / 258 | 96% | 72.70 | 220 / 230 |
adipose | 100% | 5429.12 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 74.74 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 44.21 | 29 / 29 |
spleen | 100% | 5784.37 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 92.40 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 84.86 | 1 / 1 |
blood vessel | 100% | 7404.75 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 99% | 3582.32 | 796 / 803 | 0% | 0 | 0 / 0 |
heart | 98% | 4207.45 | 847 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 92% | 5657.19 | 857 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0050890 | Biological process | cognition |
GO_0007155 | Biological process | cell adhesion |
GO_0009887 | Biological process | animal organ morphogenesis |
GO_0016020 | Cellular component | membrane |
GO_0030246 | Molecular function | carbohydrate binding |
Gene name | DGCR2 |
Protein name | DiGeorge syndrome critical region gene 2, isoform CRA_c (cDNA FLJ50536, highly similar to Integral membrane protein DGCR2/IDD) Integral membrane protein DGCR2/IDD DiGeorge syndrome critical region gene 2 |
Synonyms | DKFZp686I1730 KIAA0163 hCG_17243 IDD |
Description | FUNCTION: Putative adhesion receptor, that could be involved in cell-cell or cell-matrix interactions required for normal cell differentiation and migration. |
Accessions | ENST00000537045.5 [P98153-2] F6SYP7 ENST00000263196.12 [P98153-1] ENST00000389262.8 B7Z3C4 Q8IWC8 ENST00000545799.5 P98153 Q5CZ70 |