DEFB119 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
retinal rod cell	7 studies	31% ± 12%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
eye	4 studies	26% ± 9%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
bladder	52%	2.19	11 / 21	0%	0.01	2 / 504
esophagus	39%	2.07	561 / 1445	2%	0.06	3 / 183
stomach	31%	1.16	113 / 359	1%	0.04	4 / 286
intestine	31%	1.48	300 / 966	0%	0.00	2 / 527
prostate	31%	6.49	75 / 245	0%	0.00	1 / 502
breast	28%	2.36	127 / 459	0%	0.00	2 / 1118
brain	11%	0.34	301 / 2642	16%	3.40	115 / 705
adipose	26%	1.17	316 / 1204	0%	0	0 / 0
uterus	25%	2.48	42 / 170	0%	0.01	2 / 459
pancreas	24%	0.63	79 / 328	0%	0	0 / 178
ovary	24%	0.58	43 / 180	0%	0	0 / 430
thymus	23%	1.85	150 / 653	0%	0	0 / 605
adrenal gland	19%	0.70	50 / 258	3%	0.13	6 / 230
spleen	21%	0.63	51 / 241	0%	0	0 / 0
lung	20%	0.77	114 / 578	0%	0.01	5 / 1155
heart	18%	0.69	159 / 861	0%	0	0 / 0
liver	18%	1.83	41 / 226	0%	0	0 / 406
blood vessel	18%	0.92	234 / 1335	0%	0	0 / 0
kidney	17%	0.81	15 / 89	0%	0.01	4 / 901
skin	15%	0.92	279 / 1809	0%	0	0 / 472
peripheral blood	12%	0.34	112 / 929	0%	0	0 / 0
muscle	11%	0.95	91 / 803	0%	0	0 / 0
eye	0%	0	0 / 0	6%	1.54	5 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1