Name | Number of supported studies | Average coverage | |
---|---|---|---|
pericyte | 12 studies | 20% ± 6% | |
endothelial cell | 11 studies | 26% ± 10% | |
fibroblast | 10 studies | 27% ± 12% | |
smooth muscle cell | 9 studies | 22% ± 7% | |
epithelial cell | 6 studies | 36% ± 17% | |
basal cell | 6 studies | 34% ± 16% | |
capillary endothelial cell | 5 studies | 19% ± 4% | |
connective tissue cell | 5 studies | 21% ± 5% | |
ciliated cell | 5 studies | 29% ± 9% | |
neuron | 5 studies | 26% ± 17% | |
CD4-positive, alpha-beta T cell | 4 studies | 20% ± 4% | |
conventional dendritic cell | 4 studies | 25% ± 5% | |
myofibroblast cell | 4 studies | 19% ± 4% | |
T cell | 4 studies | 19% ± 5% | |
dendritic cell | 4 studies | 46% ± 26% | |
endothelial cell of lymphatic vessel | 4 studies | 38% ± 17% | |
endothelial cell of vascular tree | 4 studies | 19% ± 4% | |
macrophage | 4 studies | 32% ± 15% | |
pancreatic A cell | 3 studies | 33% ± 2% | |
type B pancreatic cell | 3 studies | 33% ± 7% | |
natural killer cell | 3 studies | 18% ± 2% | |
endothelial cell of artery | 3 studies | 18% ± 3% | |
club cell | 3 studies | 20% ± 5% | |
B cell | 3 studies | 25% ± 10% | |
GABAergic neuron | 3 studies | 23% ± 5% | |
glutamatergic neuron | 3 studies | 31% ± 10% | |
CD8-positive, alpha-beta T cell | 3 studies | 20% ± 3% | |
plasmacytoid dendritic cell | 3 studies | 22% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
adrenal gland | 100% | 1572.54 | 258 / 258 | 100% | 43.90 | 230 / 230 |
brain | 100% | 1616.75 | 2642 / 2642 | 100% | 53.28 | 705 / 705 |
esophagus | 100% | 1185.74 | 1445 / 1445 | 100% | 29.00 | 183 / 183 |
lung | 100% | 1164.98 | 578 / 578 | 100% | 24.03 | 1155 / 1155 |
ovary | 100% | 1117.23 | 180 / 180 | 100% | 28.74 | 430 / 430 |
stomach | 100% | 927.96 | 359 / 359 | 100% | 25.66 | 286 / 286 |
breast | 100% | 1539.62 | 459 / 459 | 100% | 29.19 | 1117 / 1118 |
uterus | 100% | 1200.20 | 170 / 170 | 100% | 26.57 | 458 / 459 |
pancreas | 100% | 560.62 | 327 / 328 | 100% | 22.59 | 178 / 178 |
thymus | 100% | 1306.42 | 653 / 653 | 100% | 36.59 | 603 / 605 |
kidney | 100% | 1235.31 | 89 / 89 | 100% | 29.71 | 898 / 901 |
bladder | 100% | 1214.33 | 21 / 21 | 100% | 23.37 | 502 / 504 |
prostate | 100% | 999.22 | 244 / 245 | 100% | 23.88 | 501 / 502 |
intestine | 100% | 1137.04 | 966 / 966 | 99% | 23.54 | 522 / 527 |
skin | 100% | 1083.10 | 1809 / 1809 | 99% | 25.45 | 466 / 472 |
liver | 100% | 624.92 | 226 / 226 | 98% | 13.82 | 396 / 406 |
adipose | 100% | 1559.67 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1619.49 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 16.80 | 29 / 29 |
spleen | 100% | 872.90 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 24.73 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 9.11 | 1 / 1 |
muscle | 99% | 736.25 | 797 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 1144.35 | 852 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 96% | 16.76 | 77 / 80 |
peripheral blood | 53% | 341.58 | 489 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0007052 | Biological process | mitotic spindle organization |
GO_0000776 | Cellular component | kinetochore |
GO_0005813 | Cellular component | centrosome |
GO_0005869 | Cellular component | dynactin complex |
GO_0005829 | Cellular component | cytosol |
GO_0070840 | Molecular function | dynein complex binding |
Gene name | DCTN6 |
Protein name | Dynactin subunit 6 (Dynactin subunit p27) (Protein WS-3) Dynactin subunit 6 |
Synonyms | WS3 |
Description | FUNCTION: Part of the dynactin complex that activates the molecular motor dynein for ultra-processive transport along microtubules. . FUNCTION: Part of the dynactin complex that activates the molecular motor dynein for ultra-processive transport along microtubules. . FUNCTION: Part of the dynactin complex that activates the molecular motor dynein for ultra-processive transport along microtubules. . |
Accessions | ENST00000519830.1 ENST00000522141.5 ENST00000221114.8 E5RIK5 ENST00000523666.5 E5RFU3 O00399 ENST00000520829.5 E5RK00 E5RGW9 |