Name | Number of supported studies | Average coverage | |
---|---|---|---|
ciliated cell | 17 studies | 34% ± 15% | |
epithelial cell | 5 studies | 32% ± 20% | |
secretory cell | 3 studies | 19% ± 2% | |
pancreatic A cell | 3 studies | 32% ± 12% | |
type B pancreatic cell | 3 studies | 33% ± 10% | |
retinal ganglion cell | 3 studies | 40% ± 19% | |
GABAergic neuron | 3 studies | 25% ± 7% | |
glutamatergic neuron | 3 studies | 35% ± 12% | |
goblet cell | 3 studies | 21% ± 4% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
pancreas | 3 studies | 32% ± 12% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
pancreas | 100% | 8808.05 | 328 / 328 | 100% | 78.01 | 178 / 178 |
prostate | 100% | 8385.76 | 245 / 245 | 100% | 227.18 | 502 / 502 |
lung | 100% | 4435.80 | 577 / 578 | 99% | 77.94 | 1141 / 1155 |
breast | 99% | 3175.17 | 455 / 459 | 99% | 148.01 | 1109 / 1118 |
stomach | 100% | 3947.38 | 358 / 359 | 97% | 59.66 | 277 / 286 |
esophagus | 97% | 3209.01 | 1407 / 1445 | 98% | 50.65 | 180 / 183 |
intestine | 95% | 2514.82 | 921 / 966 | 98% | 66.99 | 518 / 527 |
bladder | 95% | 2332.76 | 20 / 21 | 98% | 77.24 | 492 / 504 |
thymus | 100% | 5923.08 | 653 / 653 | 92% | 56.67 | 557 / 605 |
uterus | 97% | 1775.68 | 165 / 170 | 94% | 63.59 | 433 / 459 |
kidney | 100% | 3009.04 | 89 / 89 | 89% | 43.79 | 805 / 901 |
ovary | 89% | 1200.91 | 161 / 180 | 97% | 48.77 | 416 / 430 |
adrenal gland | 100% | 6887.38 | 258 / 258 | 86% | 1075.70 | 197 / 230 |
skin | 100% | 4136.07 | 1809 / 1809 | 78% | 25.40 | 370 / 472 |
liver | 85% | 1558.08 | 193 / 226 | 47% | 20.71 | 192 / 406 |
brain | 84% | 2427.97 | 2208 / 2642 | 36% | 9.98 | 254 / 705 |
tonsil | 0% | 0 | 0 / 0 | 100% | 61.65 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 39.72 | 1 / 1 |
adipose | 99% | 2019.62 | 1189 / 1204 | 0% | 0 | 0 / 0 |
spleen | 98% | 1243.34 | 236 / 241 | 0% | 0 | 0 / 0 |
heart | 75% | 1135.68 | 644 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 62% | 819.10 | 827 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 33% | 7.48 | 26 / 80 |
peripheral blood | 22% | 229.66 | 204 / 929 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 10% | 2.25 | 3 / 29 |
muscle | 2% | 17.18 | 16 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0022900 | Biological process | electron transport chain |
GO_0006879 | Biological process | intracellular iron ion homeostasis |
GO_0140576 | Biological process | ascorbate homeostasis |
GO_0042584 | Cellular component | chromaffin granule membrane |
GO_0005765 | Cellular component | lysosomal membrane |
GO_0016020 | Cellular component | membrane |
GO_0140575 | Molecular function | transmembrane monodehydroascorbate reductase activity |
GO_0016491 | Molecular function | oxidoreductase activity |
GO_0005515 | Molecular function | protein binding |
GO_0046872 | Molecular function | metal ion binding |
Gene name | CYB561 |
Protein name | Cytochrome b561 Transmembrane ascorbate-dependent reductase CYB561 (Cytochrome b-561) (Cytochrome b561) Transmembrane ascorbate-dependent reductase CYB561 (EC 7.2.1.-) (Cytochrome b-561) (Cytochrome b561) |
Synonyms | hCG_41832 |
Description | FUNCTION: Transmembrane reductase that uses ascorbate as an electron donor in the cytoplasm and transfers electrons across membranes to reduce monodehydro-L-ascorbate radical in the lumen of secretory vesicles. It is therefore involved the regeneration and homeostasis within secretory vesicles of ascorbate which in turn provides reducing equivalents needed to support the activity of intravesicular enzymes. . |
Accessions | F5H757 ENST00000578072.1 ENST00000580691.5 ENST00000582997.5 J3KSL5 ENST00000582034.5 ENST00000542042.5 ENST00000360793.8 [P49447-1] ENST00000581573.5 [P49447-1] J3QR25 J3QLS0 J3QRF9 ENST00000584291.5 [P49447-1] J3QS09 ENST00000392976.5 [P49447-1] J3QS47 ENST00000584031.5 ENST00000448884.6 [P49447-2] ENST00000582297.5 J3QKN3 ENST00000580592.1 ENST00000392975.6 [P49447-1] J3QRH5 ENST00000585153.1 P49447 |