Name | Number of supported studies | Average coverage | |
---|---|---|---|
epithelial cell | 3 studies | 19% ± 3% |
Insufficient scRNA-seq data for expression of CTU1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 322.63 | 1445 / 1445 | 100% | 16.85 | 183 / 183 |
ovary | 100% | 577.82 | 180 / 180 | 100% | 27.00 | 430 / 430 |
prostate | 100% | 398.21 | 245 / 245 | 99% | 7.47 | 498 / 502 |
uterus | 100% | 442.47 | 170 / 170 | 99% | 8.54 | 454 / 459 |
stomach | 99% | 234.13 | 356 / 359 | 100% | 15.99 | 285 / 286 |
bladder | 100% | 400.71 | 21 / 21 | 98% | 9.73 | 495 / 504 |
intestine | 100% | 301.35 | 965 / 966 | 98% | 13.00 | 517 / 527 |
skin | 100% | 314.98 | 1805 / 1809 | 98% | 6.70 | 461 / 472 |
thymus | 100% | 367.61 | 653 / 653 | 97% | 6.45 | 585 / 605 |
pancreas | 99% | 224.67 | 325 / 328 | 97% | 5.70 | 173 / 178 |
brain | 99% | 261.77 | 2621 / 2642 | 96% | 5.65 | 676 / 705 |
adrenal gland | 100% | 296.58 | 258 / 258 | 95% | 5.08 | 218 / 230 |
liver | 100% | 207.88 | 226 / 226 | 90% | 4.78 | 367 / 406 |
lung | 98% | 246.06 | 564 / 578 | 91% | 6.14 | 1051 / 1155 |
kidney | 100% | 313.17 | 89 / 89 | 88% | 3.91 | 789 / 901 |
breast | 100% | 231.38 | 457 / 459 | 87% | 4.42 | 971 / 1118 |
eye | 0% | 0 | 0 / 0 | 100% | 7.83 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 10.07 | 29 / 29 |
spleen | 100% | 363.71 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 6.11 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 15.25 | 1 / 1 |
adipose | 99% | 234.69 | 1190 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 99% | 203.62 | 1318 / 1335 | 0% | 0 | 0 / 0 |
heart | 98% | 187.02 | 843 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 95% | 241.50 | 881 / 929 | 0% | 0 | 0 / 0 |
muscle | 91% | 170.72 | 730 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0002098 | Biological process | tRNA wobble uridine modification |
GO_0034227 | Biological process | tRNA thio-modification |
GO_0032447 | Biological process | protein urmylation |
GO_0002143 | Biological process | tRNA wobble position uridine thiolation |
GO_0002144 | Cellular component | cytosolic tRNA wobble base thiouridylase complex |
GO_0005829 | Cellular component | cytosol |
GO_0016779 | Molecular function | nucleotidyltransferase activity |
GO_0000049 | Molecular function | tRNA binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CTU1 |
Protein name | Cytoplasmic tRNA 2-thiolation protein 1 (EC 2.7.7.-) (ATP-binding domain-containing protein 3) (Cancer-associated gene protein) (Cytoplasmic tRNA adenylyltransferase 1) |
Synonyms | ATPBD3 NCS6 |
Description | FUNCTION: Plays a central role in 2-thiolation of mcm(5)S(2)U at tRNA wobble positions of tRNA(Lys), tRNA(Glu) and tRNA(Gln). Directly binds tRNAs and probably acts by catalyzing adenylation of tRNAs, an intermediate required for 2-thiolation. It is unclear whether it acts as a sulfurtransferase that transfers sulfur from thiocarboxylated URM1 onto the uridine of tRNAs at wobble position. . |
Accessions | ENST00000421832.3 Q7Z7A3 |