CTRC report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
acinar cell	3 studies	85% ± 11%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
pancreas	100%	466369.06	328 / 328	63%	594.52	112 / 178
spleen	100%	100.00	241 / 241	0%	0	0 / 0
prostate	96%	79.56	236 / 245	0%	0.00	1 / 502
lung	91%	52.68	524 / 578	1%	0.02	9 / 1155
peripheral blood	91%	80.57	841 / 929	0%	0	0 / 0
uterus	86%	48.72	147 / 170	2%	0.05	11 / 459
thymus	81%	57.76	531 / 653	7%	0.21	43 / 605
stomach	83%	86.40	297 / 359	3%	0.31	9 / 286
adrenal gland	83%	48.95	213 / 258	1%	0.02	3 / 230
adipose	83%	203.52	1004 / 1204	0%	0	0 / 0
breast	82%	117.98	378 / 459	0%	0.01	3 / 1118
kidney	82%	46.91	73 / 89	0%	0.02	3 / 901
bladder	81%	28.71	17 / 21	1%	0.04	7 / 504
ovary	81%	64.44	145 / 180	1%	3.77	6 / 430
intestine	78%	53.20	752 / 966	3%	13.66	14 / 527
esophagus	76%	69.70	1092 / 1445	2%	0.03	3 / 183
liver	76%	63.43	171 / 226	0%	0.10	2 / 406
skin	76%	62.71	1374 / 1809	0%	0	0 / 472
brain	64%	32.25	1680 / 2642	2%	0.04	16 / 705
blood vessel	64%	93.16	849 / 1335	0%	0	0 / 0
heart	49%	40.97	423 / 861	0%	0	0 / 0
muscle	38%	22.29	308 / 803	0%	0	0 / 0
tonsil	0%	0	0 / 0	4%	0.07	2 / 45
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1