Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 16 studies | 78% ± 22% | |
glutamatergic neuron | 13 studies | 71% ± 26% | |
GABAergic neuron | 11 studies | 75% ± 17% | |
oligodendrocyte | 11 studies | 33% ± 19% | |
astrocyte | 9 studies | 40% ± 23% | |
interneuron | 6 studies | 73% ± 22% | |
neuron | 5 studies | 53% ± 18% | |
microglial cell | 5 studies | 42% ± 21% | |
endothelial cell | 4 studies | 57% ± 17% | |
retinal ganglion cell | 4 studies | 41% ± 22% | |
differentiation-committed oligodendrocyte precursor | 3 studies | 62% ± 8% | |
GABAergic interneuron | 3 studies | 84% ± 1% | |
granule cell | 3 studies | 69% ± 21% | |
macrophage | 3 studies | 30% ± 11% | |
GABAergic amacrine cell | 3 studies | 29% ± 9% | |
amacrine cell | 3 studies | 31% ± 10% | |
glycinergic amacrine cell | 3 studies | 38% ± 7% | |
ependymal cell | 3 studies | 61% ± 15% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 18 studies | 50% ± 24% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 798.05 | 2624 / 2642 | 71% | 5.90 | 501 / 705 |
prostate | 57% | 110.94 | 139 / 245 | 1% | 0.03 | 7 / 502 |
pancreas | 48% | 102.13 | 158 / 328 | 1% | 0.01 | 1 / 178 |
spleen | 35% | 55.95 | 85 / 241 | 0% | 0 | 0 / 0 |
adrenal gland | 0% | 0.67 | 1 / 258 | 15% | 0.76 | 35 / 230 |
bladder | 14% | 13.00 | 3 / 21 | 1% | 0.01 | 3 / 504 |
uterus | 7% | 10.15 | 12 / 170 | 3% | 0.09 | 14 / 459 |
skin | 1% | 1.19 | 20 / 1809 | 4% | 0.16 | 20 / 472 |
breast | 0% | 0 | 0 / 459 | 5% | 0.43 | 53 / 1118 |
lung | 3% | 3.78 | 16 / 578 | 1% | 0.03 | 15 / 1155 |
kidney | 3% | 4.12 | 3 / 89 | 0% | 0.01 | 3 / 901 |
esophagus | 1% | 1.04 | 12 / 1445 | 3% | 0.04 | 5 / 183 |
stomach | 1% | 0.46 | 2 / 359 | 3% | 0.05 | 8 / 286 |
thymus | 1% | 1.23 | 6 / 653 | 0% | 0.02 | 3 / 605 |
blood vessel | 1% | 1.70 | 15 / 1335 | 0% | 0 | 0 / 0 |
intestine | 1% | 0.65 | 6 / 966 | 0% | 0 | 0 / 527 |
ovary | 0% | 0 | 0 / 180 | 0% | 0.01 | 2 / 430 |
adipose | 0% | 0.06 | 1 / 1204 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 80 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 0% | 0 | 0 / 406 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0050773 | Biological process | regulation of dendrite development |
GO_0005886 | Cellular component | plasma membrane |
Gene name | CSMD3 |
Protein name | CSMD3 protein Alternative protein CSMD3 CUB and Sushi multiple domains 3 CUB and sushi domain-containing protein 3 (CUB and sushi multiple domains protein 3) |
Synonyms | KIAA1894 |
Description | FUNCTION: Involved in dendrite development. . |
Accessions | ENST00000339701.7 L8EBH7 A5D6Y2 Q7Z407 H7BXX0 ENST00000297405.10 [Q7Z407-1] ENST00000343508.7 [Q7Z407-2] ENST00000455883.2 [Q7Z407-3] |