CPNE9 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	3 studies	43% ± 13%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
adrenal gland	99%	194.61	255 / 258	60%	4.09	137 / 230
brain	95%	1280.54	2506 / 2642	60%	3.13	425 / 705
intestine	45%	25.28	437 / 966	23%	0.44	123 / 527
skin	53%	52.82	960 / 1809	6%	0.10	28 / 472
stomach	20%	10.59	72 / 359	17%	0.37	50 / 286
lymph node	0%	0	0 / 0	28%	0.60	8 / 29
spleen	22%	11.66	53 / 241	0%	0	0 / 0
bladder	5%	1.52	1 / 21	11%	0.23	57 / 504
lung	9%	3.77	53 / 578	5%	0.09	55 / 1155
pancreas	2%	0.66	5 / 328	12%	0.26	22 / 178
kidney	6%	2.79	5 / 89	8%	0.15	73 / 901
esophagus	7%	3.15	102 / 1445	6%	0.14	11 / 183
ovary	5%	2.41	9 / 180	7%	0.14	32 / 430
uterus	4%	1.85	7 / 170	7%	0.13	30 / 459
breast	1%	0.46	5 / 459	6%	0.13	65 / 1118
prostate	5%	3.79	13 / 245	1%	0.14	6 / 502
peripheral blood	6%	2.41	53 / 929	0%	0	0 / 0
adipose	3%	1.34	38 / 1204	0%	0	0 / 0
liver	0%	0.15	1 / 226	2%	0.04	9 / 406
thymus	1%	0.45	7 / 653	1%	0.03	9 / 605
eye	0%	0	0 / 0	1%	0.03	1 / 80
blood vessel	1%	0.33	10 / 1335	0%	0	0 / 0
heart	0%	0.13	3 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
muscle	0%	0	0 / 803	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1