Name | Number of supported studies | Average coverage | |
---|---|---|---|
smooth muscle cell | 15 studies | 30% ± 10% | |
fibroblast | 15 studies | 27% ± 16% | |
microglial cell | 12 studies | 48% ± 20% | |
adipocyte | 9 studies | 37% ± 14% | |
macrophage | 8 studies | 37% ± 14% | |
endothelial cell | 7 studies | 23% ± 7% | |
cardiac muscle cell | 5 studies | 53% ± 18% | |
pericyte | 5 studies | 24% ± 6% | |
myofibroblast cell | 4 studies | 25% ± 8% | |
dendritic cell | 4 studies | 24% ± 7% | |
myeloid cell | 4 studies | 21% ± 4% | |
Mueller cell | 3 studies | 26% ± 6% | |
hepatocyte | 3 studies | 51% ± 20% | |
muscle cell | 3 studies | 51% ± 15% | |
connective tissue cell | 3 studies | 24% ± 11% | |
monocyte | 3 studies | 21% ± 3% | |
conventional dendritic cell | 3 studies | 19% ± 2% | |
B cell | 3 studies | 25% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 96% | 2117.72 | 236 / 245 | 92% | 12.42 | 460 / 502 |
breast | 97% | 1811.26 | 444 / 459 | 75% | 5.56 | 833 / 1118 |
lung | 97% | 2003.04 | 561 / 578 | 66% | 5.29 | 758 / 1155 |
liver | 92% | 1391.46 | 208 / 226 | 61% | 3.97 | 247 / 406 |
intestine | 86% | 2809.45 | 831 / 966 | 63% | 3.99 | 333 / 527 |
adrenal gland | 94% | 1619.02 | 242 / 258 | 52% | 4.56 | 119 / 230 |
bladder | 100% | 2659.19 | 21 / 21 | 45% | 2.73 | 229 / 504 |
ovary | 100% | 6473.51 | 180 / 180 | 43% | 1.84 | 183 / 430 |
stomach | 59% | 1338.90 | 213 / 359 | 75% | 7.85 | 215 / 286 |
uterus | 99% | 3562.06 | 168 / 170 | 28% | 2.01 | 127 / 459 |
esophagus | 63% | 1430.09 | 917 / 1445 | 59% | 4.07 | 108 / 183 |
thymus | 83% | 987.21 | 543 / 653 | 33% | 1.17 | 197 / 605 |
kidney | 36% | 432.65 | 32 / 89 | 64% | 5.77 | 580 / 901 |
blood vessel | 100% | 10219.47 | 1335 / 1335 | 0% | 0 | 0 / 0 |
adipose | 100% | 2623.35 | 1201 / 1204 | 0% | 0 | 0 / 0 |
muscle | 96% | 2333.72 | 770 / 803 | 0% | 0 | 0 / 0 |
spleen | 90% | 1092.07 | 218 / 241 | 0% | 0 | 0 / 0 |
heart | 86% | 1023.01 | 739 / 861 | 0% | 0 | 0 / 0 |
skin | 46% | 1262.16 | 840 / 1809 | 38% | 4.44 | 181 / 472 |
pancreas | 3% | 24.33 | 9 / 328 | 80% | 7.41 | 142 / 178 |
brain | 2% | 24.00 | 65 / 2642 | 51% | 2.38 | 357 / 705 |
tonsil | 0% | 0 | 0 / 0 | 29% | 2.88 | 13 / 45 |
lymph node | 0% | 0 | 0 / 0 | 24% | 0.87 | 7 / 29 |
eye | 0% | 0 | 0 / 0 | 19% | 1.76 | 15 / 80 |
peripheral blood | 0% | 1.60 | 2 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005783 | Cellular component | endoplasmic reticulum |
Gene name | CPED1 |
Protein name | Cadherin like and PC-esterase domain containing 1 Cadherin-like and PC-esterase domain-containing protein 1 |
Synonyms | hCG_1812950 FLJ21986 UNQ9432/PRO34713 C7orf58 |
Description | |
Accessions | A4D0V7 ENST00000423795.5 H0YB19 ENST00000310396.10 [A4D0V7-1] G5E9U2 ENST00000340646.9 E9PCC8 ENST00000520801.5 ENST00000450913.6 [A4D0V7-2] Q5MJQ4 E7ENG7 ENST00000443817.1 ENST00000428526.5 |