Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 5 studies | 32% ± 21% | |
glutamatergic neuron | 4 studies | 57% ± 30% | |
microglial cell | 4 studies | 28% ± 18% | |
GABAergic neuron | 4 studies | 54% ± 29% | |
astrocyte | 4 studies | 40% ± 24% | |
interneuron | 4 studies | 54% ± 30% | |
endothelial cell | 3 studies | 26% ± 7% | |
epithelial cell | 3 studies | 23% ± 4% | |
oligodendrocyte precursor cell | 3 studies | 30% ± 8% | |
adipocyte | 3 studies | 21% ± 2% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
ovary | 100% | 3205.81 | 180 / 180 | 100% | 27.15 | 429 / 430 |
breast | 100% | 1878.64 | 459 / 459 | 100% | 45.87 | 1113 / 1118 |
brain | 100% | 1507.70 | 2633 / 2642 | 100% | 35.52 | 704 / 705 |
skin | 100% | 2215.10 | 1809 / 1809 | 99% | 40.91 | 467 / 472 |
thymus | 100% | 1420.57 | 653 / 653 | 99% | 31.79 | 598 / 605 |
bladder | 100% | 1468.71 | 21 / 21 | 98% | 29.90 | 496 / 504 |
lung | 100% | 1224.60 | 576 / 578 | 97% | 24.97 | 1123 / 1155 |
prostate | 100% | 1150.36 | 245 / 245 | 97% | 21.39 | 486 / 502 |
intestine | 100% | 1144.11 | 966 / 966 | 97% | 24.10 | 509 / 527 |
uterus | 100% | 1895.25 | 170 / 170 | 97% | 25.58 | 443 / 459 |
pancreas | 98% | 766.55 | 320 / 328 | 98% | 20.30 | 175 / 178 |
stomach | 100% | 938.76 | 359 / 359 | 95% | 20.94 | 273 / 286 |
esophagus | 100% | 1225.22 | 1442 / 1445 | 93% | 18.01 | 171 / 183 |
adrenal gland | 100% | 2914.23 | 258 / 258 | 93% | 21.09 | 214 / 230 |
kidney | 99% | 1015.43 | 88 / 89 | 93% | 18.32 | 835 / 901 |
liver | 75% | 353.03 | 169 / 226 | 70% | 8.68 | 283 / 406 |
adipose | 100% | 1515.82 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 17.47 | 29 / 29 |
muscle | 100% | 1377.04 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1169.68 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 12.36 | 1 / 1 |
blood vessel | 100% | 1233.47 | 1333 / 1335 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 99% | 29.39 | 79 / 80 |
tonsil | 0% | 0 | 0 / 0 | 98% | 20.91 | 44 / 45 |
heart | 94% | 1009.69 | 807 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 85% | 963.65 | 790 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0072384 | Biological process | organelle transport along microtubule |
GO_0006886 | Biological process | intracellular protein transport |
GO_0006888 | Biological process | endoplasmic reticulum to Golgi vesicle-mediated transport |
GO_0006890 | Biological process | retrograde vesicle-mediated transport, Golgi to endoplasmic reticulum |
GO_0006891 | Biological process | intra-Golgi vesicle-mediated transport |
GO_0009306 | Biological process | protein secretion |
GO_0000139 | Cellular component | Golgi membrane |
GO_0030126 | Cellular component | COPI vesicle coat |
GO_0005783 | Cellular component | endoplasmic reticulum |
GO_0005829 | Cellular component | cytosol |
GO_0030426 | Cellular component | growth cone |
GO_0005793 | Cellular component | endoplasmic reticulum-Golgi intermediate compartment |
GO_0005789 | Cellular component | endoplasmic reticulum membrane |
GO_0030133 | Cellular component | transport vesicle |
GO_0005198 | Molecular function | structural molecule activity |
Gene name | COPG2 |
Protein name | COPG2 Coatomer subunit gamma-2 (Gamma-2-coat protein) (Gamma-2-COP) |
Synonyms | |
Description | FUNCTION: The coatomer is a cytosolic protein complex that binds to dilysine motifs and reversibly associates with Golgi non-clathrin-coated vesicles, which further mediate biosynthetic protein transport from the ER, via the Golgi up to the trans Golgi network. Coatomer complex is required for budding from Golgi membranes, and is essential for the retrograde Golgi-to-ER transport of dilysine-tagged proteins. In mammals, the coatomer can only be recruited by membranes associated to ADP-ribosylation factors (ARFs), which are small GTP-binding proteins; the complex also influences the Golgi structural integrity, as well as the processing, activity, and endocytic recycling of LDL receptors (By similarity). . |
Accessions | ENST00000425248.5 [Q9UBF2-1] Q9UBF2 ENST00000330992.8 [Q9UBF2-2] Q96PK0 |