COL6A6 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
fibroblast	10 studies	25% ± 7%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	100%	4700.64	577 / 578	49%	2.05	563 / 1155
breast	81%	682.32	371 / 459	30%	0.85	332 / 1118
heart	90%	1254.71	771 / 861	0%	0	0 / 0
spleen	83%	309.41	199 / 241	0%	0	0 / 0
ovary	55%	147.26	99 / 180	24%	0.94	103 / 430
adipose	72%	456.81	864 / 1204	0%	0	0 / 0
uterus	55%	205.99	93 / 170	15%	0.93	69 / 459
skin	47%	162.91	851 / 1809	11%	0.29	54 / 472
liver	50%	88.68	113 / 226	1%	0.01	4 / 406
tonsil	0%	0	0 / 0	40%	0.99	18 / 45
thymus	36%	63.68	233 / 653	4%	0.09	25 / 605
esophagus	17%	35.62	240 / 1445	11%	0.26	20 / 183
blood vessel	23%	106.42	301 / 1335	0%	0	0 / 0
pancreas	6%	9.98	21 / 328	9%	0.24	16 / 178
muscle	15%	25.50	119 / 803	0%	0	0 / 0
stomach	8%	13.80	30 / 359	3%	0.14	10 / 286
adrenal gland	5%	7.98	14 / 258	6%	0.18	13 / 230
brain	9%	12.05	234 / 2642	0%	0.00	2 / 705
bladder	0%	0	0 / 21	9%	0.24	45 / 504
intestine	3%	7.67	27 / 966	3%	0.09	14 / 527
lymph node	0%	0	0 / 0	3%	0.08	1 / 29
prostate	1%	1.71	3 / 245	1%	0.01	3 / 502
kidney	0%	0	0 / 89	1%	0.06	8 / 901
peripheral blood	0%	0.09	1 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1