Name | Number of supported studies | Average coverage | |
---|---|---|---|
glutamatergic neuron | 7 studies | 44% ± 21% | |
endothelial cell | 3 studies | 29% ± 7% | |
pericyte | 3 studies | 17% ± 2% | |
GABAergic neuron | 3 studies | 35% ± 6% | |
interneuron | 3 studies | 33% ± 10% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 40% ± 20% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 86% | 343.09 | 210 / 245 | 95% | 15.97 | 479 / 502 |
brain | 96% | 995.22 | 2542 / 2642 | 72% | 8.59 | 508 / 705 |
liver | 93% | 398.39 | 210 / 226 | 45% | 4.08 | 184 / 406 |
ovary | 52% | 59.26 | 93 / 180 | 71% | 17.81 | 305 / 430 |
adrenal gland | 99% | 614.03 | 256 / 258 | 23% | 4.00 | 53 / 230 |
pancreas | 97% | 175.13 | 317 / 328 | 11% | 0.95 | 19 / 178 |
kidney | 80% | 285.97 | 71 / 89 | 18% | 0.98 | 160 / 901 |
lung | 33% | 45.86 | 188 / 578 | 20% | 3.53 | 233 / 1155 |
uterus | 22% | 32.14 | 38 / 170 | 20% | 21.09 | 93 / 459 |
skin | 22% | 30.99 | 395 / 1809 | 19% | 1.95 | 88 / 472 |
eye | 0% | 0 | 0 / 0 | 35% | 1.26 | 28 / 80 |
stomach | 24% | 24.09 | 87 / 359 | 5% | 0.65 | 14 / 286 |
thymus | 6% | 4.74 | 39 / 653 | 21% | 4.91 | 129 / 605 |
bladder | 14% | 20.57 | 3 / 21 | 13% | 1.37 | 63 / 504 |
breast | 14% | 15.25 | 66 / 459 | 10% | 1.07 | 110 / 1118 |
lymph node | 0% | 0 | 0 / 0 | 17% | 0.48 | 5 / 29 |
esophagus | 0% | 0.57 | 7 / 1445 | 10% | 0.96 | 18 / 183 |
tonsil | 0% | 0 | 0 / 0 | 9% | 0.46 | 4 / 45 |
spleen | 5% | 3.77 | 12 / 241 | 0% | 0 | 0 / 0 |
intestine | 1% | 0.45 | 5 / 966 | 3% | 0.26 | 18 / 527 |
adipose | 3% | 3.40 | 40 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 1% | 0.67 | 9 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 1% | 2.77 | 10 / 1335 | 0% | 0 | 0 / 0 |
heart | 0% | 0.18 | 2 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0010811 | Biological process | positive regulation of cell-substrate adhesion |
GO_0005788 | Cellular component | endoplasmic reticulum lumen |
GO_1990324 | Cellular component | collagen type XXVI trimer |
GO_0005576 | Cellular component | extracellular region |
GO_0005794 | Cellular component | Golgi apparatus |
GO_0062023 | Cellular component | collagen-containing extracellular matrix |
GO_0005886 | Cellular component | plasma membrane |
Gene name | COL26A1 |
Protein name | Collagen alpha-1(XXVI) chain (Alpha-1 type XXVI collagen) (EMI domain-containing protein 2) (Emilin and multimerin domain-containing protein 2) (Emu2) |
Synonyms | EMU2 EMID2 |
Description | |
Accessions | Q96A83 ENST00000313669.12 [Q96A83-1] ENST00000613501.1 [Q96A83-2] |