Insufficient scRNA-seq data for expression of COL22A1 at single-cell level.
Insufficient scRNA-seq data for expression of COL22A1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
prostate | 97% | 1191.94 | 238 / 245 | 64% | 5.40 | 322 / 502 |
brain | 69% | 248.62 | 1827 / 2642 | 58% | 7.53 | 409 / 705 |
uterus | 94% | 565.19 | 159 / 170 | 33% | 8.09 | 150 / 459 |
kidney | 85% | 376.08 | 76 / 89 | 27% | 2.16 | 246 / 901 |
stomach | 90% | 269.38 | 323 / 359 | 22% | 2.26 | 62 / 286 |
adrenal gland | 37% | 619.55 | 95 / 258 | 69% | 34.51 | 159 / 230 |
ovary | 64% | 88.04 | 116 / 180 | 37% | 3.06 | 157 / 430 |
intestine | 78% | 304.63 | 750 / 966 | 14% | 0.94 | 72 / 527 |
esophagus | 53% | 127.66 | 769 / 1445 | 36% | 3.77 | 66 / 183 |
pancreas | 15% | 19.68 | 48 / 328 | 74% | 7.78 | 132 / 178 |
skin | 7% | 11.66 | 119 / 1809 | 61% | 32.82 | 288 / 472 |
thymus | 45% | 57.05 | 297 / 653 | 15% | 3.16 | 92 / 605 |
tonsil | 0% | 0 | 0 / 0 | 60% | 22.10 | 27 / 45 |
bladder | 38% | 195.52 | 8 / 21 | 21% | 3.68 | 105 / 504 |
muscle | 54% | 219.95 | 434 / 803 | 0% | 0 | 0 / 0 |
breast | 21% | 28.40 | 97 / 459 | 32% | 3.68 | 357 / 1118 |
lung | 19% | 16.47 | 108 / 578 | 31% | 4.02 | 358 / 1155 |
eye | 0% | 0 | 0 / 0 | 31% | 5.39 | 25 / 80 |
spleen | 24% | 22.12 | 57 / 241 | 0% | 0 | 0 / 0 |
liver | 3% | 3.15 | 7 / 226 | 17% | 2.34 | 67 / 406 |
adipose | 18% | 32.77 | 214 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 14% | 0.36 | 4 / 29 |
heart | 12% | 12.88 | 101 / 861 | 0% | 0 | 0 / 0 |
blood vessel | 6% | 8.01 | 79 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 2% | 1.82 | 15 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0030198 | Biological process | extracellular matrix organization |
GO_0005615 | Cellular component | extracellular space |
GO_0005788 | Cellular component | endoplasmic reticulum lumen |
GO_0005581 | Cellular component | collagen trimer |
GO_0005576 | Cellular component | extracellular region |
GO_0062023 | Cellular component | collagen-containing extracellular matrix |
GO_0030020 | Molecular function | extracellular matrix structural constituent conferring tensile strength |
Gene name | COL22A1 |
Protein name | Collagen type XXII alpha 1 chain Collagen alpha-1(XXII) chain Alternative protein COL22A1 |
Synonyms | |
Description | FUNCTION: Acts as a cell adhesion ligand for skin epithelial cells and fibroblasts. |
Accessions | Q8NFW1 ENST00000522546.1 H0YAX7 L8EAR4 ENST00000303045.11 [Q8NFW1-1] |