Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte precursor cell | 14 studies | 28% ± 9% |
Insufficient scRNA-seq data for expression of COL20A1 at tissue level.
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 900.07 | 2626 / 2642 | 92% | 34.02 | 651 / 705 |
spleen | 37% | 78.62 | 90 / 241 | 0% | 0 | 0 / 0 |
adrenal gland | 3% | 6.67 | 9 / 258 | 27% | 2.00 | 62 / 230 |
skin | 0% | 0.17 | 3 / 1809 | 14% | 10.99 | 68 / 472 |
ovary | 14% | 20.82 | 25 / 180 | 0% | 0.01 | 2 / 430 |
uterus | 8% | 14.08 | 14 / 170 | 2% | 0.07 | 8 / 459 |
muscle | 6% | 7.23 | 45 / 803 | 0% | 0 | 0 / 0 |
stomach | 4% | 5.21 | 15 / 359 | 1% | 0.08 | 4 / 286 |
kidney | 4% | 6.16 | 4 / 89 | 1% | 0.01 | 5 / 901 |
eye | 0% | 0 | 0 / 0 | 5% | 0.14 | 4 / 80 |
blood vessel | 4% | 5.11 | 58 / 1335 | 0% | 0 | 0 / 0 |
esophagus | 3% | 4.28 | 44 / 1445 | 1% | 0.01 | 2 / 183 |
prostate | 2% | 4.92 | 6 / 245 | 0% | 0 | 0 / 502 |
intestine | 2% | 2.22 | 18 / 966 | 1% | 0.02 | 3 / 527 |
lung | 0% | 0 | 0 / 578 | 1% | 0.01 | 10 / 1155 |
adipose | 1% | 0.87 | 10 / 1204 | 0% | 0 | 0 / 0 |
thymus | 0% | 0.54 | 3 / 653 | 0% | 0.00 | 1 / 605 |
pancreas | 0% | 0 | 0 / 328 | 1% | 0.08 | 1 / 178 |
breast | 0% | 0 | 0 / 459 | 1% | 0.01 | 6 / 1118 |
bladder | 0% | 0 | 0 / 21 | 0% | 0.02 | 2 / 504 |
heart | 0% | 0.47 | 3 / 861 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
liver | 0% | 0 | 0 / 226 | 0% | 0 | 0 / 406 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 45 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0005581 | Cellular component | collagen trimer |
GO_0005788 | Cellular component | endoplasmic reticulum lumen |
GO_0005576 | Cellular component | extracellular region |
GO_0062023 | Cellular component | collagen-containing extracellular matrix |
Gene name | COL20A1 |
Protein name | Collagen alpha-1(XX) chain Collagen type XX alpha 1 chain |
Synonyms | KIAA1510 |
Description | FUNCTION: Probable collagen protein. |
Accessions | Q9P218 ENST00000358894.11 [Q9P218-1] ENST00000415763.5 B7ZBI4 ENST00000422202.5 [Q9P218-2] ENST00000455906.1 B7ZBI5 |