Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 19 studies | 33% ± 16% | |
endothelial cell of lymphatic vessel | 13 studies | 41% ± 19% | |
astrocyte | 10 studies | 34% ± 14% | |
GABAergic neuron | 7 studies | 33% ± 15% | |
glutamatergic neuron | 5 studies | 41% ± 4% | |
vein endothelial cell | 5 studies | 26% ± 15% | |
interneuron | 4 studies | 32% ± 13% | |
endothelial cell of sinusoid | 3 studies | 47% ± 14% | |
capillary endothelial cell | 3 studies | 24% ± 5% | |
neuron | 3 studies | 36% ± 26% | |
endothelial cell of vascular tree | 3 studies | 45% ± 11% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 99% | 507.82 | 1426 / 1445 | 19% | 0.38 | 34 / 183 |
kidney | 98% | 277.31 | 87 / 89 | 12% | 0.21 | 107 / 901 |
bladder | 100% | 132.14 | 21 / 21 | 5% | 0.09 | 25 / 504 |
breast | 100% | 535.97 | 457 / 459 | 2% | 0.03 | 22 / 1118 |
adipose | 100% | 498.86 | 1204 / 1204 | 0% | 0 | 0 / 0 |
skin | 75% | 185.47 | 1351 / 1809 | 21% | 0.53 | 98 / 472 |
uterus | 85% | 144.80 | 145 / 170 | 9% | 0.17 | 42 / 459 |
lung | 87% | 139.86 | 505 / 578 | 6% | 0.10 | 70 / 1155 |
prostate | 86% | 107.56 | 210 / 245 | 1% | 0.01 | 5 / 502 |
intestine | 85% | 274.11 | 825 / 966 | 1% | 0.02 | 6 / 527 |
heart | 83% | 150.23 | 711 / 861 | 0% | 0 | 0 / 0 |
thymus | 79% | 106.37 | 513 / 653 | 2% | 0.04 | 14 / 605 |
spleen | 78% | 116.54 | 187 / 241 | 0% | 0 | 0 / 0 |
blood vessel | 77% | 179.75 | 1033 / 1335 | 0% | 0 | 0 / 0 |
adrenal gland | 59% | 54.36 | 152 / 258 | 10% | 0.17 | 23 / 230 |
brain | 56% | 62.22 | 1491 / 2642 | 9% | 0.20 | 66 / 705 |
liver | 40% | 36.39 | 90 / 226 | 11% | 0.23 | 45 / 406 |
stomach | 48% | 93.95 | 172 / 359 | 1% | 0.03 | 4 / 286 |
muscle | 43% | 38.27 | 346 / 803 | 0% | 0 | 0 / 0 |
ovary | 34% | 39.96 | 61 / 180 | 0% | 0.01 | 2 / 430 |
pancreas | 31% | 27.06 | 101 / 328 | 3% | 0.07 | 6 / 178 |
tonsil | 0% | 0 | 0 / 0 | 9% | 0.17 | 4 / 45 |
peripheral blood | 4% | 9.73 | 37 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 1% | 0.02 | 1 / 80 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0007155 | Biological process | cell adhesion |
GO_0016020 | Cellular component | membrane |
Gene name | CNTNAP3B |
Protein name | Contactin associated protein family member 3B Contactin-associated protein-like 3B (Cell recognition molecule Caspr3b) |
Synonyms | CASPR3B |
Description | |
Accessions | ENST00000377561.7 [Q96NU0-1] ENST00000341990.8 A0A087X119 ENST00000612828.4 ENST00000479351.5 ENST00000476961.5 ENST00000276974.7 A0A087WUG9 A0A087WXL9 A0A087X0T4 F2Z2X5 A0A087X2E4 ENST00000619138.4 A0A087WZ03 ENST00000489789.3 ENST00000617422.4 A0A2P0CT92 Q96NU0 |