CNTNAP3 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell of lymphatic vessel	6 studies	26% ± 8%	Explore
astrocyte	6 studies	28% ± 10%	Explore
glutamatergic neuron	5 studies	31% ± 8%	Explore
GABAergic neuron	4 studies	37% ± 9%	Explore
endothelial cell	3 studies	19% ± 4%	Explore
interneuron	3 studies	22% ± 3%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	3 studies	30% ± 7%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
esophagus	100%	1239.61	1442 / 1445	48%	1.53	87 / 183
prostate	90%	242.14	220 / 245	25%	0.38	127 / 502
bladder	100%	184.86	21 / 21	13%	0.33	67 / 504
breast	99%	592.36	455 / 459	12%	0.25	133 / 1118
uterus	73%	159.76	124 / 170	33%	0.78	151 / 459
kidney	85%	284.74	76 / 89	19%	0.38	169 / 901
brain	78%	246.71	2053 / 2642	24%	0.47	170 / 705
lung	80%	198.19	460 / 578	21%	0.47	244 / 1155
adipose	99%	475.01	1194 / 1204	0%	0	0 / 0
spleen	98%	494.30	236 / 241	0%	0	0 / 0
skin	72%	794.49	1311 / 1809	20%	0.51	93 / 472
thymus	78%	166.96	511 / 653	13%	0.40	79 / 605
intestine	84%	514.51	808 / 966	5%	0.07	25 / 527
heart	83%	327.39	718 / 861	0%	0	0 / 0
peripheral blood	70%	709.49	649 / 929	0%	0	0 / 0
blood vessel	65%	222.67	872 / 1335	0%	0	0 / 0
tonsil	0%	0	0 / 0	38%	0.69	17 / 45
stomach	32%	67.29	116 / 359	4%	0.13	12 / 286
liver	24%	41.19	55 / 226	7%	0.15	29 / 406
adrenal gland	18%	27.30	47 / 258	12%	0.19	28 / 230
ovary	17%	33.40	30 / 180	7%	0.14	30 / 430
pancreas	2%	3.63	8 / 328	13%	0.26	23 / 178
muscle	4%	6.76	36 / 803	0%	0	0 / 0
eye	0%	0	0 / 0	3%	0.04	2 / 80
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1