Name | Number of supported studies | Average coverage | |
---|---|---|---|
endothelial cell | 16 studies | 31% ± 10% | |
fibroblast | 12 studies | 26% ± 9% | |
macrophage | 11 studies | 33% ± 12% | |
microglial cell | 11 studies | 33% ± 13% | |
astrocyte | 10 studies | 32% ± 18% | |
oligodendrocyte precursor cell | 8 studies | 27% ± 9% | |
GABAergic neuron | 7 studies | 30% ± 17% | |
myeloid cell | 6 studies | 26% ± 8% | |
dendritic cell | 6 studies | 22% ± 4% | |
pericyte | 6 studies | 21% ± 6% | |
interneuron | 5 studies | 35% ± 23% | |
myofibroblast cell | 5 studies | 23% ± 7% | |
endothelial cell of lymphatic vessel | 5 studies | 32% ± 5% | |
smooth muscle cell | 5 studies | 22% ± 2% | |
neuron | 4 studies | 26% ± 8% | |
glutamatergic neuron | 4 studies | 40% ± 18% | |
connective tissue cell | 4 studies | 24% ± 4% | |
monocyte | 4 studies | 23% ± 4% | |
classical monocyte | 3 studies | 16% ± 1% | |
hematopoietic precursor cell | 3 studies | 19% ± 1% | |
glial cell | 3 studies | 27% ± 8% | |
progenitor cell | 3 studies | 34% ± 4% | |
epithelial cell | 3 studies | 27% ± 13% | |
hepatocyte | 3 studies | 60% ± 15% | |
neural progenitor cell | 3 studies | 32% ± 15% | |
ependymal cell | 3 studies | 36% ± 9% | |
alveolar macrophage | 3 studies | 26% ± 6% | |
chondrocyte | 3 studies | 22% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
uterus | 100% | 1524.42 | 170 / 170 | 94% | 5.18 | 430 / 459 |
thymus | 100% | 738.50 | 652 / 653 | 93% | 2.50 | 562 / 605 |
kidney | 99% | 465.29 | 88 / 89 | 94% | 4.03 | 845 / 901 |
brain | 95% | 432.61 | 2498 / 2642 | 98% | 3.81 | 689 / 705 |
breast | 100% | 1059.06 | 459 / 459 | 92% | 3.49 | 1029 / 1118 |
prostate | 100% | 784.82 | 245 / 245 | 92% | 4.32 | 460 / 502 |
liver | 100% | 1104.81 | 226 / 226 | 91% | 3.43 | 370 / 406 |
ovary | 100% | 1749.17 | 180 / 180 | 90% | 2.92 | 389 / 430 |
skin | 98% | 729.15 | 1780 / 1809 | 88% | 3.36 | 414 / 472 |
adrenal gland | 99% | 671.43 | 255 / 258 | 87% | 2.29 | 199 / 230 |
pancreas | 90% | 272.57 | 295 / 328 | 93% | 2.40 | 165 / 178 |
lung | 99% | 659.90 | 575 / 578 | 83% | 2.68 | 955 / 1155 |
esophagus | 99% | 787.65 | 1431 / 1445 | 67% | 3.01 | 122 / 183 |
bladder | 100% | 968.00 | 21 / 21 | 62% | 2.21 | 310 / 504 |
intestine | 99% | 932.32 | 952 / 966 | 59% | 1.44 | 312 / 527 |
stomach | 90% | 467.16 | 323 / 359 | 64% | 1.68 | 182 / 286 |
blood vessel | 100% | 1054.65 | 1335 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 708.81 | 241 / 241 | 0% | 0 | 0 / 0 |
adipose | 100% | 1199.29 | 1203 / 1204 | 0% | 0 | 0 / 0 |
heart | 93% | 371.31 | 802 / 861 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 91% | 5.32 | 41 / 45 |
muscle | 83% | 247.40 | 663 / 803 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 69% | 2.13 | 20 / 29 |
eye | 0% | 0 | 0 / 0 | 63% | 1.60 | 50 / 80 |
peripheral blood | 38% | 142.19 | 354 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0010457 | Biological process | centriole-centriole cohesion |
GO_0033365 | Biological process | protein localization to organelle |
GO_0005814 | Cellular component | centriole |
GO_0005813 | Cellular component | centrosome |
GO_0070062 | Cellular component | extracellular exosome |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005829 | Cellular component | cytosol |
GO_0005737 | Cellular component | cytoplasm |
GO_0030674 | Molecular function | protein-macromolecule adaptor activity |
GO_0019901 | Molecular function | protein kinase binding |
GO_0019904 | Molecular function | protein domain specific binding |
Gene name | CNTLN |
Protein name | Centlein (Centrosomal protein) |
Synonyms | C9orf101 C9orf39 |
Description | FUNCTION: Required for centrosome cohesion and recruitment of CEP68 to centrosomes. . |
Accessions | ENST00000380647.8 [Q9NXG0-2] Q9NXG0 ENST00000380641.4 [Q9NXG0-3] |