Name | Number of supported studies | Average coverage | |
---|---|---|---|
GABAergic neuron | 3 studies | 28% ± 7% | |
glutamatergic neuron | 3 studies | 36% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 4 studies | 24% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 4139.84 | 1445 / 1445 | 100% | 34.46 | 183 / 183 |
lung | 100% | 4513.99 | 578 / 578 | 100% | 37.29 | 1155 / 1155 |
prostate | 100% | 4979.51 | 245 / 245 | 100% | 37.36 | 502 / 502 |
breast | 100% | 4428.77 | 459 / 459 | 100% | 44.57 | 1117 / 1118 |
intestine | 100% | 4998.77 | 966 / 966 | 100% | 32.98 | 526 / 527 |
bladder | 100% | 4569.19 | 21 / 21 | 100% | 36.70 | 503 / 504 |
skin | 100% | 4597.86 | 1809 / 1809 | 100% | 60.51 | 471 / 472 |
uterus | 100% | 5563.08 | 170 / 170 | 100% | 40.14 | 458 / 459 |
ovary | 100% | 5760.20 | 180 / 180 | 100% | 37.76 | 429 / 430 |
thymus | 100% | 4697.14 | 653 / 653 | 100% | 34.94 | 603 / 605 |
stomach | 100% | 3677.53 | 359 / 359 | 100% | 33.01 | 285 / 286 |
liver | 100% | 2345.13 | 226 / 226 | 100% | 27.02 | 404 / 406 |
pancreas | 100% | 2589.37 | 328 / 328 | 99% | 33.95 | 177 / 178 |
brain | 99% | 3253.22 | 2621 / 2642 | 100% | 52.92 | 705 / 705 |
kidney | 100% | 3405.94 | 89 / 89 | 99% | 30.15 | 890 / 901 |
adrenal gland | 100% | 4412.26 | 258 / 258 | 98% | 42.38 | 226 / 230 |
adipose | 100% | 4038.14 | 1204 / 1204 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 100% | 47.40 | 80 / 80 |
lymph node | 0% | 0 | 0 / 0 | 100% | 52.56 | 29 / 29 |
spleen | 100% | 6165.83 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 34.92 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 13.48 | 1 / 1 |
blood vessel | 100% | 4067.60 | 1334 / 1335 | 0% | 0 | 0 / 0 |
muscle | 100% | 3181.47 | 802 / 803 | 0% | 0 | 0 / 0 |
heart | 99% | 3282.48 | 852 / 861 | 0% | 0 | 0 / 0 |
peripheral blood | 93% | 3930.24 | 864 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006370 | Biological process | 7-methylguanosine mRNA capping |
GO_0006397 | Biological process | mRNA processing |
GO_0032259 | Biological process | methylation |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0005654 | Cellular component | nucleoplasm |
GO_0005737 | Cellular component | cytoplasm |
GO_0005634 | Cellular component | nucleus |
GO_0004483 | Molecular function | mRNA (nucleoside-2'-O-)-methyltransferase activity |
GO_0003676 | Molecular function | nucleic acid binding |
Gene name | CMTR1 |
Protein name | Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 (EC 2.1.1.57) (Cap methyltransferase 1) (Cap1 2'O-ribose methyltransferase 1) (MTr1) (hMTr1) (FtsJ methyltransferase domain-containing protein 2) (Interferon-stimulated gene 95 kDa protein) (ISG95) Cap-specific mRNA (nucleoside-2'-O-)-methyltransferase 1 (EC 2.1.1.57) (Cap1 2'O-ribose methyltransferase 1) |
Synonyms | MTR1 KIAA0082 FTSJD2 |
Description | FUNCTION: S-adenosyl-L-methionine-dependent methyltransferase that mediates mRNA cap1 2'-O-ribose methylation to the 5'-cap structure of mRNAs. Methylates the ribose of the first nucleotide of a m(7)GpppG-capped mRNA and small nuclear RNA (snRNA) to produce m(7)GpppRm (cap1). Displays a preference for cap0 transcripts. Cap1 modification is linked to higher levels of translation. May be involved in the interferon response pathway. . FUNCTION: S-adenosyl-L-methionine-dependent methyltransferase that mediates RNA cap1 2'-O-ribose methylation to the 5'-cap structure of RNAs. Methylates the ribose of the first nucleotide of a m(7)GpppG-capped mRNA to produce m(7)GpppNmp (cap1). . FUNCTION: S-adenosyl-L-methionine-dependent methyltransferase that mediates RNA cap1 2'-O-ribose methylation to the 5'-cap structure of RNAs. Methylates the ribose of the first nucleotide of a m(7)GpppG-capped mRNA to produce m(7)GpppNmp (cap1). . FUNCTION: S-adenosyl-L-methionine-dependent methyltransferase that mediates RNA cap1 2'-O-ribose methylation to the 5'-cap structure of RNAs. Methylates the ribose of the first nucleotide of a m(7)GpppG-capped mRNA to produce m(7)GpppNmp (cap1). . |
Accessions | ENST00000373451.9 Q5T7F5 ENST00000475364.1 ENST00000457419.1 H0YCQ1 Q8N1G2 ENST00000455891.5 H0Y4T0 |