CLTRN | OmnibusX

Name	Number of supported studies	Average coverage
epithelial cell of proximal tubule	5 studies	51% ± 12%	Explore

sc-RNAseq data

Insufficient scRNA-seq data for expression of CLTRN at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
kidney	100%	5258.09	89 / 89	92%	155.85	826 / 901
thymus	100%	109.31	652 / 653	75%	3.25	452 / 605
prostate	100%	62.82	245 / 245	57%	1.83	288 / 502
pancreas	100%	108.61	327 / 328	48%	2.62	85 / 178
liver	100%	595.04	226 / 226	47%	9.02	190 / 406
ovary	100%	118.22	180 / 180	28%	1.03	122 / 430
lung	89%	62.06	517 / 578	38%	3.65	435 / 1155
uterus	98%	55.16	166 / 170	24%	1.24	109 / 459
bladder	100%	60.24	21 / 21	16%	0.84	79 / 504
adrenal gland	98%	42.56	254 / 258	14%	0.61	32 / 230
breast	93%	57.73	428 / 459	18%	0.75	200 / 1118
brain	93%	37.34	2451 / 2642	18%	0.50	127 / 705
stomach	98%	106.34	353 / 359	7%	0.47	20 / 286
esophagus	91%	26.93	1313 / 1445	13%	0.61	23 / 183
skin	89%	31.40	1607 / 1809	8%	0.24	37 / 472
intestine	86%	22.88	829 / 966	6%	0.28	32 / 527
heart	89%	32.77	764 / 861	0%	0	0 / 0
adipose	85%	22.32	1027 / 1204	0%	0	0 / 0
blood vessel	80%	22.09	1064 / 1335	0%	0	0 / 0
spleen	59%	10.45	142 / 241	0%	0	0 / 0
peripheral blood	22%	5.00	203 / 929	0%	0	0 / 0
eye	0%	0	0 / 0	18%	0.54	14 / 80
muscle	8%	1.06	61 / 803	0%	0	0 / 0
lymph node	0%	0	0 / 0	3%	0.07	1 / 29
tonsil	0%	0	0 / 0	2%	0.07	1 / 45
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0051957	Biological process	positive regulation of amino acid transport
GO_0017156	Biological process	calcium-ion regulated exocytosis
GO_1905737	Biological process	positive regulation of L-proline import across plasma membrane
GO_0022898	Biological process	regulation of transmembrane transporter activity
GO_0035493	Biological process	SNARE complex assembly
GO_0035773	Biological process	insulin secretion involved in cellular response to glucose stimulus
GO_0031526	Cellular component	brush border membrane
GO_0070062	Cellular component	extracellular exosome
GO_0005886	Cellular component	plasma membrane
GO_0005737	Cellular component	cytoplasm
GO_0042803	Molecular function	protein homodimerization activity
GO_0005515	Molecular function	protein binding

Gene name	CLTRN
Protein name	Collectrin (Transmembrane protein 27) Collectrin, amino acid transport regulator
Synonyms	TMEM27 UNQ679/PRO1312
Description	FUNCTION: Plays an important role in amino acid transport by acting as binding partner of amino acid transporters SLC6A18 and SLC6A19, regulating their trafficking on the cell surface and their amino acid transporter activity (By similarity). May also play a role in trafficking of amino acid transporters SLC3A1 and SLC7A9 to the renal cortical cell membrane (By similarity). Regulator of SNARE complex function . Stimulator of beta cell replication . .
Accessions	ENST00000380342.4 ENST00000650271.1 A0A3B3ITM8 Q9HBJ8

CLTRN report