Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 14 studies | 42% ± 17% | |
astrocyte | 10 studies | 41% ± 20% | |
oligodendrocyte precursor cell | 10 studies | 40% ± 19% | |
adipocyte | 9 studies | 30% ± 8% | |
GABAergic neuron | 7 studies | 50% ± 25% | |
glutamatergic neuron | 6 studies | 49% ± 26% | |
fibroblast | 6 studies | 25% ± 17% | |
macrophage | 6 studies | 25% ± 7% | |
endothelial cell | 5 studies | 32% ± 18% | |
non-classical monocyte | 5 studies | 23% ± 8% | |
type I pneumocyte | 5 studies | 28% ± 6% | |
monocyte | 5 studies | 27% ± 6% | |
epithelial cell | 4 studies | 41% ± 22% | |
retinal pigment epithelial cell | 4 studies | 40% ± 18% | |
alveolar macrophage | 4 studies | 42% ± 16% | |
interneuron | 4 studies | 56% ± 25% | |
GABAergic interneuron | 3 studies | 31% ± 8% | |
retinal ganglion cell | 3 studies | 25% ± 5% | |
myeloid cell | 3 studies | 27% ± 10% | |
basal cell | 3 studies | 35% ± 28% | |
mesothelial cell | 3 studies | 35% ± 9% | |
ependymal cell | 3 studies | 37% ± 20% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
thymus | 100% | 5648.80 | 653 / 653 | 99% | 40.29 | 600 / 605 |
brain | 99% | 3047.82 | 2626 / 2642 | 100% | 16.54 | 703 / 705 |
lung | 100% | 3857.29 | 577 / 578 | 95% | 18.54 | 1093 / 1155 |
ovary | 100% | 4755.58 | 180 / 180 | 90% | 6.61 | 388 / 430 |
uterus | 100% | 2898.09 | 170 / 170 | 89% | 11.09 | 410 / 459 |
skin | 100% | 5111.13 | 1809 / 1809 | 87% | 12.93 | 410 / 472 |
prostate | 100% | 3063.04 | 244 / 245 | 87% | 7.63 | 437 / 502 |
esophagus | 100% | 3726.85 | 1445 / 1445 | 85% | 17.45 | 156 / 183 |
adrenal gland | 95% | 1561.60 | 245 / 258 | 89% | 20.42 | 204 / 230 |
kidney | 98% | 1722.02 | 87 / 89 | 77% | 7.13 | 696 / 901 |
breast | 100% | 2973.22 | 457 / 459 | 73% | 7.66 | 819 / 1118 |
bladder | 100% | 4519.05 | 21 / 21 | 67% | 7.99 | 337 / 504 |
pancreas | 50% | 560.77 | 165 / 328 | 93% | 12.50 | 165 / 178 |
intestine | 93% | 3195.04 | 899 / 966 | 27% | 2.15 | 143 / 527 |
stomach | 63% | 1839.34 | 225 / 359 | 41% | 2.99 | 118 / 286 |
muscle | 100% | 9143.48 | 803 / 803 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 3.23 | 1 / 1 |
adipose | 100% | 3295.78 | 1203 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 2875.35 | 1330 / 1335 | 0% | 0 | 0 / 0 |
spleen | 100% | 1993.11 | 240 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 96% | 9.08 | 43 / 45 |
heart | 91% | 2687.41 | 787 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 79% | 5.19 | 23 / 29 |
eye | 0% | 0 | 0 / 0 | 78% | 8.24 | 62 / 80 |
liver | 17% | 181.22 | 39 / 226 | 45% | 4.15 | 183 / 406 |
peripheral blood | 46% | 925.96 | 430 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0031122 | Biological process | cytoplasmic microtubule organization |
GO_0043231 | Cellular component | intracellular membrane-bounded organelle |
GO_0035371 | Cellular component | microtubule plus-end |
GO_0005938 | Cellular component | cell cortex |
GO_0005634 | Cellular component | nucleus |
GO_0051010 | Molecular function | microtubule plus-end binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CLIP4 |
Protein name | CAP-Gly domain containing linker protein family member 4 CAP-Gly domain containing linker protein family member 4 (Restin-like 2, isoform CRA_d) CAP-Gly domain-containing linker protein 4 (Restin-like protein 2) |
Synonyms | RSNL2 hCG_1783765 |
Description | |
Accessions | A0A8I5KTX2 A0A8I5KW63 A0A8I5QKL4 A0A8I5KX39 A0A8I5QKP4 A0A8I5QJ97 A0A8I5QKV0 ENST00000689070.1 ENST00000686470.1 ENST00000415891.5 A0A8I5KVT2 A0A8I5KSB1 ENST00000693694.1 A0A8I5KRC7 A0A8I5KRK9 A0A8I5KT47 A0A8I5KRT4 ENST00000691129.1 ENST00000401605.5 [Q8N3C7-3] ENST00000687889.1 ENST00000693446.1 ENST00000404424.5 [Q8N3C7-1] ENST00000438819.1 ENST00000471165.2 ENST00000691585.1 A0A8I5KTN3 ENST00000691796.1 A0A8I5KUB8 ENST00000687450.1 A0A8I5QKZ2 E9PBB1 ENST00000687915.1 ENST00000685126.1 ENST00000687506.1 ENST00000693513.1 E7EW06 ENST00000693264.1 [Q8N3C7-1] Q8N3C7 A0A8I5KYN5 ENST00000689017.1 ENST00000456385.5 ENST00000691341.1 ENST00000687104.1 ENST00000401617.6 C9IYE4 ENST00000320081.10 [Q8N3C7-1] ENST00000686125.1 ENST00000686848.1 ENST00000689605.1 ENST00000687166.1 G3XAK3 ENST00000690615.1 B5MCH3 ENST00000688724.1 ENST00000685829.1 A0A8I5KXU9 A0A8I5KS79 ENST00000690063.1 [Q8N3C7-1] ENST00000449202.5 ENST00000693041.1 A0A8I5QKM8 A0A8I5KTC6 |