Name | Number of supported studies | Average coverage | |
---|---|---|---|
oligodendrocyte | 13 studies | 38% ± 14% | |
oligodendrocyte precursor cell | 12 studies | 38% ± 15% | |
astrocyte | 11 studies | 23% ± 7% | |
GABAergic neuron | 8 studies | 33% ± 15% | |
glutamatergic neuron | 8 studies | 44% ± 18% | |
microglial cell | 8 studies | 26% ± 9% | |
endothelial cell | 7 studies | 34% ± 17% | |
interneuron | 6 studies | 39% ± 17% | |
pericyte | 6 studies | 30% ± 16% | |
fibroblast | 6 studies | 19% ± 3% | |
neuron | 5 studies | 30% ± 9% | |
macrophage | 5 studies | 23% ± 7% | |
GABAergic interneuron | 3 studies | 29% ± 10% | |
granule cell | 3 studies | 25% ± 4% | |
abnormal cell | 3 studies | 24% ± 5% | |
epithelial cell | 3 studies | 31% ± 9% | |
endothelial cell of lymphatic vessel | 3 studies | 22% ± 5% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 15 studies | 35% ± 16% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 100% | 11501.51 | 2642 / 2642 | 100% | 178.18 | 704 / 705 |
stomach | 100% | 3070.43 | 359 / 359 | 99% | 41.82 | 282 / 286 |
intestine | 100% | 4162.51 | 966 / 966 | 98% | 41.59 | 519 / 527 |
pancreas | 98% | 2543.55 | 322 / 328 | 98% | 34.52 | 174 / 178 |
skin | 99% | 3543.08 | 1790 / 1809 | 95% | 39.27 | 448 / 472 |
esophagus | 94% | 2308.61 | 1352 / 1445 | 97% | 31.68 | 178 / 183 |
adrenal gland | 99% | 2353.71 | 255 / 258 | 91% | 26.88 | 210 / 230 |
bladder | 100% | 3058.71 | 21 / 21 | 79% | 19.55 | 399 / 504 |
ovary | 100% | 3935.52 | 180 / 180 | 78% | 16.00 | 334 / 430 |
lung | 99% | 2850.51 | 573 / 578 | 74% | 15.32 | 857 / 1155 |
kidney | 73% | 1807.17 | 65 / 89 | 91% | 24.21 | 824 / 901 |
prostate | 98% | 2711.50 | 241 / 245 | 66% | 8.04 | 330 / 502 |
uterus | 99% | 3223.38 | 169 / 170 | 64% | 14.55 | 295 / 459 |
breast | 86% | 1540.89 | 394 / 459 | 72% | 9.98 | 802 / 1118 |
thymus | 47% | 671.27 | 308 / 653 | 57% | 7.34 | 347 / 605 |
eye | 0% | 0 | 0 / 0 | 100% | 22.00 | 80 / 80 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.65 | 1 / 1 |
blood vessel | 99% | 3407.09 | 1327 / 1335 | 0% | 0 | 0 / 0 |
spleen | 94% | 1618.53 | 227 / 241 | 0% | 0 | 0 / 0 |
adipose | 93% | 1975.51 | 1122 / 1204 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 78% | 15.32 | 35 / 45 |
lymph node | 0% | 0 | 0 / 0 | 66% | 32.85 | 19 / 29 |
heart | 53% | 777.91 | 453 / 861 | 0% | 0 | 0 / 0 |
liver | 8% | 111.71 | 17 / 226 | 40% | 10.51 | 164 / 406 |
peripheral blood | 25% | 1797.85 | 233 / 929 | 0% | 0 | 0 / 0 |
muscle | 3% | 33.84 | 21 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0031122 | Biological process | cytoplasmic microtubule organization |
GO_0035371 | Cellular component | microtubule plus-end |
GO_0005938 | Cellular component | cell cortex |
GO_0005875 | Cellular component | microtubule associated complex |
GO_0005634 | Cellular component | nucleus |
GO_0051010 | Molecular function | microtubule plus-end binding |
GO_0008017 | Molecular function | microtubule binding |
Gene name | CLIP2 |
Protein name | CAP-Gly domain containing linker protein 2 CAP-Gly domain-containing linker protein 2 (Cytoplasmic linker protein 115) (CLIP-115) (Cytoplasmic linker protein 2) (Williams-Beuren syndrome chromosomal region 3 protein) (Williams-Beuren syndrome chromosomal region 4 protein) CAP-GLY domain containing linker protein 2 (Cytoplasmic linker 2, isoform CRA_a) |
Synonyms | CYLN2 WBSCR3 WBSCR4 hCG_18038 WSCR4 KIAA0291 |
Description | FUNCTION: Seems to link microtubules to dendritic lamellar body (DLB), a membranous organelle predominantly present in bulbous dendritic appendages of neurons linked by dendrodendritic gap junctions. May operate in the control of brain-specific organelle translocations (By similarity). . |
Accessions | ENST00000487447.1 ENST00000223398.11 [Q9UDT6-1] Q9UDT6 A7E2F7 ENST00000493166.1 H7C5H8 ENST00000361545.9 [Q9UDT6-2] H7C4L6 |