Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| type I pneumocyte | 12 studies | 57% ± 19% | |
| endothelial cell | 11 studies | 27% ± 9% | |
| podocyte | 6 studies | 87% ± 12% | |
| cardiac muscle cell | 5 studies | 53% ± 13% | |
| epithelial cell | 4 studies | 18% ± 2% | |
| capillary endothelial cell | 4 studies | 29% ± 10% | |
| club cell | 4 studies | 26% ± 7% | |
| mesothelial cell | 3 studies | 43% ± 20% | |
| glutamatergic neuron | 3 studies | 22% ± 3% | |
| brush cell | 3 studies | 45% ± 14% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| heart | 4 studies | 27% ± 5% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| thymus | 88% | 1982.81 | 575 / 653 | 82% | 10.60 | 497 / 605 |
| lung | 99% | 9054.92 | 574 / 578 | 61% | 7.40 | 706 / 1155 |
| intestine | 51% | 2689.95 | 489 / 966 | 90% | 14.60 | 473 / 527 |
| kidney | 92% | 11711.58 | 82 / 89 | 41% | 3.29 | 373 / 901 |
| breast | 65% | 1484.88 | 299 / 459 | 40% | 1.82 | 452 / 1118 |
| muscle | 100% | 21304.93 | 803 / 803 | 0% | 0 | 0 / 0 |
| spleen | 100% | 7969.27 | 241 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 100% | 2.28 | 1 / 1 |
| heart | 100% | 13268.04 | 860 / 861 | 0% | 0 | 0 / 0 |
| ovary | 1% | 15.36 | 2 / 180 | 96% | 30.62 | 414 / 430 |
| stomach | 2% | 20.82 | 7 / 359 | 83% | 10.34 | 236 / 286 |
| adipose | 84% | 3092.84 | 1007 / 1204 | 0% | 0 | 0 / 0 |
| pancreas | 0% | 0 | 0 / 328 | 71% | 4.87 | 127 / 178 |
| esophagus | 21% | 307.53 | 302 / 1445 | 41% | 3.92 | 75 / 183 |
| bladder | 10% | 114.81 | 2 / 21 | 39% | 5.09 | 197 / 504 |
| prostate | 8% | 135.00 | 20 / 245 | 26% | 0.96 | 132 / 502 |
| uterus | 8% | 112.28 | 13 / 170 | 26% | 2.39 | 120 / 459 |
| tonsil | 0% | 0 | 0 / 0 | 18% | 0.58 | 8 / 45 |
| lymph node | 0% | 0 | 0 / 0 | 17% | 0.51 | 5 / 29 |
| brain | 5% | 59.56 | 122 / 2642 | 12% | 0.35 | 87 / 705 |
| adrenal gland | 3% | 42.94 | 7 / 258 | 10% | 1.65 | 23 / 230 |
| skin | 2% | 27.87 | 30 / 1809 | 10% | 0.43 | 49 / 472 |
| blood vessel | 10% | 195.03 | 132 / 1335 | 0% | 0 | 0 / 0 |
| liver | 0% | 0 | 0 / 226 | 10% | 0.56 | 40 / 406 |
| eye | 0% | 0 | 0 / 0 | 1% | 0.07 | 1 / 80 |
| peripheral blood | 0% | 2.50 | 2 / 929 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| GO_0007601 | Biological process | visual perception |
| GO_0007605 | Biological process | sensory perception of sound |
| GO_1902476 | Biological process | chloride transmembrane transport |
| GO_0006821 | Biological process | chloride transport |
| GO_0007565 | Biological process | female pregnancy |
| GO_0005813 | Cellular component | centrosome |
| GO_0016324 | Cellular component | apical plasma membrane |
| GO_0015629 | Cellular component | actin cytoskeleton |
| GO_0070062 | Cellular component | extracellular exosome |
| GO_0034707 | Cellular component | chloride channel complex |
| GO_0005938 | Cellular component | cell cortex |
| GO_0005794 | Cellular component | Golgi apparatus |
| GO_0120044 | Cellular component | stereocilium base |
| GO_0005739 | Cellular component | mitochondrion |
| GO_0005515 | Molecular function | protein binding |
| GO_0005254 | Molecular function | chloride channel activity |
| Gene name | CLIC5 |
| Protein name | CLIC5 protein Chloride intracellular channel protein 5 Chloride intracellular channel 5 Chloride intracellular channel protein |
| Synonyms | hCG_2001062 |
| Description | FUNCTION: Required for normal hearing . It is necessary for the formation of stereocilia in the inner ear and normal development of the organ of Corti (By similarity). Can insert into membranes and form poorly selective ion channels that may also transport chloride ions. May play a role in the regulation of transepithelial ion absorption and secretion. Is required for the development and/or maintenance of the proper glomerular endothelial cell and podocyte architecture . Plays a role in formation of the lens suture in the eye, which is important for normal optical properties of the lens (By similarity). . |
| Accessions | A0A5F9ZHK1 ENST00000642250.1 Q53G01 A0A2R8Y4M1 A0A2R8Y615 Q9NZA1 ENST00000644878.1 A0A2R8YGW2 Q49AE1 Q8N675 ENST00000644324.1 ENST00000672327.1 ENST00000544153.3 [Q9NZA1-3] ENST00000339561.12 [Q9NZA1-2] ENST00000185206.12 [Q9NZA1-1] |
