CLHC1 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	8 studies	29% ± 11%	Explore
astrocyte	4 studies	32% ± 9%	Explore
epithelial cell	3 studies	21% ± 3%	Explore
GABAergic neuron	3 studies	42% ± 2%	Explore
glutamatergic neuron	3 studies	43% ± 4%	Explore
oligodendrocyte precursor cell	3 studies	24% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	4 studies	32% ± 9%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	272.29	2624 / 2642	100%	6.82	705 / 705
prostate	100%	626.89	245 / 245	99%	3.37	497 / 502
thymus	100%	555.56	653 / 653	97%	3.58	585 / 605
breast	99%	297.27	456 / 459	93%	2.92	1044 / 1118
pancreas	100%	250.91	327 / 328	92%	2.53	164 / 178
adrenal gland	100%	343.15	258 / 258	89%	2.67	204 / 230
bladder	100%	359.86	21 / 21	86%	2.69	433 / 504
uterus	100%	488.21	170 / 170	86%	2.48	393 / 459
lung	99%	324.87	572 / 578	84%	2.22	967 / 1155
ovary	100%	507.29	180 / 180	79%	2.12	339 / 430
esophagus	100%	296.53	1445 / 1445	78%	1.89	143 / 183
kidney	100%	316.11	89 / 89	73%	2.02	657 / 901
intestine	100%	344.49	966 / 966	71%	1.45	374 / 527
stomach	100%	276.96	359 / 359	65%	1.37	185 / 286
skin	99%	265.67	1798 / 1809	55%	1.23	261 / 472
spleen	100%	384.18	241 / 241	0%	0	0 / 0
ureter	0%	0	0 / 0	100%	2.15	1 / 1
blood vessel	99%	234.80	1326 / 1335	0%	0	0 / 0
adipose	98%	219.76	1182 / 1204	0%	0	0 / 0
liver	78%	91.42	176 / 226	17%	0.42	69 / 406
heart	91%	167.99	782 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	72%	1.35	21 / 29
muscle	70%	74.29	565 / 803	0%	0	0 / 0
tonsil	0%	0	0 / 0	53%	0.85	24 / 45
eye	0%	0	0 / 0	44%	1.18	35 / 80
peripheral blood	36%	74.48	337 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0