Name | Number of supported studies | Average coverage | |
---|---|---|---|
mesothelial cell | 10 studies | 39% ± 14% | |
enterocyte | 6 studies | 39% ± 12% | |
endothelial cell | 5 studies | 23% ± 8% | |
intestinal crypt stem cell | 4 studies | 27% ± 6% | |
transit amplifying cell | 4 studies | 28% ± 7% | |
epithelial cell | 4 studies | 31% ± 12% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
intestine | 3 studies | 21% ± 6% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
intestine | 99% | 2744.61 | 961 / 966 | 99% | 39.53 | 522 / 527 |
prostate | 100% | 1197.42 | 245 / 245 | 98% | 8.53 | 493 / 502 |
ovary | 100% | 1766.44 | 180 / 180 | 97% | 13.21 | 419 / 430 |
skin | 100% | 888.09 | 1805 / 1809 | 97% | 13.39 | 460 / 472 |
stomach | 99% | 728.67 | 355 / 359 | 98% | 42.25 | 281 / 286 |
liver | 100% | 954.47 | 226 / 226 | 97% | 43.68 | 394 / 406 |
bladder | 100% | 951.05 | 21 / 21 | 97% | 18.65 | 487 / 504 |
thymus | 100% | 1013.82 | 651 / 653 | 95% | 9.51 | 577 / 605 |
kidney | 100% | 1211.40 | 89 / 89 | 95% | 12.34 | 856 / 901 |
esophagus | 99% | 716.36 | 1435 / 1445 | 96% | 26.31 | 175 / 183 |
uterus | 100% | 1734.98 | 170 / 170 | 93% | 10.04 | 428 / 459 |
breast | 100% | 1747.72 | 459 / 459 | 93% | 7.82 | 1039 / 1118 |
lung | 100% | 1120.78 | 576 / 578 | 93% | 12.36 | 1077 / 1155 |
brain | 92% | 497.69 | 2442 / 2642 | 99% | 15.05 | 699 / 705 |
pancreas | 91% | 410.75 | 297 / 328 | 98% | 17.67 | 174 / 178 |
adrenal gland | 83% | 338.89 | 213 / 258 | 88% | 7.21 | 202 / 230 |
adipose | 100% | 3233.57 | 1204 / 1204 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 16.20 | 29 / 29 |
spleen | 100% | 2167.85 | 241 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 100% | 7.34 | 1 / 1 |
blood vessel | 99% | 703.40 | 1316 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 98% | 949.69 | 912 / 929 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 94% | 13.54 | 75 / 80 |
tonsil | 0% | 0 | 0 / 0 | 89% | 6.42 | 40 / 45 |
heart | 84% | 425.88 | 719 / 861 | 0% | 0 | 0 / 0 |
muscle | 39% | 146.75 | 313 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0006811 | Biological process | monoatomic ion transport |
GO_0016338 | Biological process | calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0070830 | Biological process | bicellular tight junction assembly |
GO_0005886 | Cellular component | plasma membrane |
GO_0016328 | Cellular component | lateral plasma membrane |
GO_0005923 | Cellular component | bicellular tight junction |
GO_0042802 | Molecular function | identical protein binding |
GO_0005198 | Molecular function | structural molecule activity |
Gene name | CLDN15 |
Protein name | Claudin-15 Claudin |
Synonyms | |
Description | FUNCTION: Claudins function as major constituents of the tight junction complexes that regulate the permeability of epithelia. While some claudin family members function as impermeable barriers, others mediate the permeability to ions and small molecules. Often, several claudin family members are coexpressed and interact with each other, and this determines the overall permeability. CLDN15 forms tight junctions that mediate the paracellular transport of small monovalent cations along a concentration gradient, due to selective permeability for Na(+), Li(+) and K(+) ions, but selects against Cl(-) ions. Plays an important role in paracellular Na(+) transport in the intestine and in Na(+) homeostasis. Required for normal Na(+)-dependent intestinal nutrient uptake. . FUNCTION: Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity. . FUNCTION: Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity. . FUNCTION: Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity. . FUNCTION: Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity. . |
Accessions | ENST00000611078.4 C9J3Z2 ENST00000433833.1 ENST00000401528.5 ENST00000412417.1 ENST00000414035.5 Q96FX9 P56746 C9JHQ4 ENST00000308344.10 H7C2D7 |