Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 10 studies | 35% ± 14% | |
epithelial cell of proximal tubule | 8 studies | 28% ± 10% | |
kidney loop of Henle epithelial cell | 6 studies | 45% ± 19% | |
basal cell | 5 studies | 31% ± 19% | |
secretory cell | 5 studies | 32% ± 8% | |
epithelial cell | 4 studies | 39% ± 16% | |
endothelial cell of artery | 4 studies | 21% ± 4% | |
oligodendrocyte precursor cell | 4 studies | 26% ± 7% | |
club cell | 3 studies | 36% ± 7% | |
duct epithelial cell | 3 studies | 20% ± 3% | |
mucus secreting cell | 3 studies | 27% ± 9% | |
serous secreting cell | 3 studies | 50% ± 11% | |
ciliated cell | 3 studies | 32% ± 9% | |
Mueller cell | 3 studies | 22% ± 7% | |
pancreatic ductal cell | 3 studies | 70% ± 9% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
kidney | 5 studies | 21% ± 4% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
kidney | 100% | 2470.07 | 89 / 89 | 84% | 22.79 | 761 / 901 |
pancreas | 100% | 4498.28 | 328 / 328 | 80% | 53.06 | 143 / 178 |
brain | 97% | 1368.09 | 2562 / 2642 | 61% | 10.36 | 431 / 705 |
ovary | 4% | 6.75 | 7 / 180 | 79% | 42.04 | 339 / 430 |
tonsil | 0% | 0 | 0 / 0 | 60% | 14.08 | 27 / 45 |
skin | 56% | 425.53 | 1020 / 1809 | 1% | 0.17 | 6 / 472 |
lung | 14% | 36.79 | 80 / 578 | 43% | 12.56 | 493 / 1155 |
uterus | 26% | 141.69 | 44 / 170 | 30% | 10.27 | 137 / 459 |
thymus | 0% | 0.32 | 1 / 653 | 55% | 15.79 | 334 / 605 |
esophagus | 15% | 91.04 | 218 / 1445 | 17% | 3.24 | 32 / 183 |
liver | 11% | 22.60 | 24 / 226 | 16% | 13.53 | 64 / 406 |
prostate | 8% | 25.11 | 19 / 245 | 12% | 1.98 | 58 / 502 |
breast | 7% | 24.08 | 33 / 459 | 4% | 1.73 | 50 / 1118 |
bladder | 0% | 0 | 0 / 21 | 11% | 2.67 | 54 / 504 |
intestine | 0% | 0.42 | 2 / 966 | 9% | 3.36 | 47 / 527 |
stomach | 1% | 2.53 | 4 / 359 | 6% | 1.40 | 17 / 286 |
adipose | 3% | 13.57 | 33 / 1204 | 0% | 0 | 0 / 0 |
adrenal gland | 0% | 1.15 | 1 / 258 | 1% | 0.28 | 2 / 230 |
eye | 0% | 0 | 0 / 0 | 1% | 0.09 | 1 / 80 |
blood vessel | 1% | 2.42 | 13 / 1335 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 2.81 | 3 / 929 | 0% | 0 | 0 / 0 |
muscle | 0% | 0.21 | 1 / 803 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0006811 | Biological process | monoatomic ion transport |
GO_0043269 | Biological process | regulation of monoatomic ion transport |
GO_0016338 | Biological process | calcium-independent cell-cell adhesion via plasma membrane cell-adhesion molecules |
GO_0007155 | Biological process | cell adhesion |
GO_0070830 | Biological process | bicellular tight junction assembly |
GO_0005737 | Cellular component | cytoplasm |
GO_0005886 | Cellular component | plasma membrane |
GO_0005923 | Cellular component | bicellular tight junction |
GO_0042802 | Molecular function | identical protein binding |
GO_0005515 | Molecular function | protein binding |
GO_0005198 | Molecular function | structural molecule activity |
Gene name | CLDN10 |
Protein name | Claudin-10 (Oligodendrocyte-specific protein-like) (OSP-like) Claudin 10 |
Synonyms | |
Description | FUNCTION: Plays a major role in tight junction-specific obliteration of the intercellular space, through calcium-independent cell-adhesion activity. Involved in the regulation of paracellular epithelia permeability to ions in multiple organs. It acts as a paracellular ion channel probably forming permselective pores; isoform 1 appears to create pores preferentially permeable to cations and isoform 2 for anions. In sweat glands and in the thick ascending limb (TAL) of Henle's loop in kidney, it controls paracellular sodium permeability which is essential for proper sweat production and renal function . . |
Accessions | P78369 ENST00000376873.7 [P78369-2] ENST00000376855.1 ENST00000299339.3 [P78369-1] Q5W075 |