CFAP54 report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	18 studies	45% ± 22%	Explore
astrocyte	6 studies	37% ± 21%	Explore
plasma cell	3 studies	24% ± 6%	Explore
glutamatergic neuron	3 studies	40% ± 12%	Explore
ependymal cell	3 studies	89% ± 7%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	5 studies	29% ± 13%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	98%	314.81	569 / 578	12%	0.37	141 / 1155
ovary	88%	64.22	158 / 180	22%	0.42	94 / 430
brain	85%	147.39	2246 / 2642	23%	0.63	160 / 705
thymus	100%	271.92	651 / 653	4%	0.07	25 / 605
uterus	95%	229.55	162 / 170	8%	0.23	39 / 459
spleen	100%	104.02	240 / 241	0%	0	0 / 0
prostate	93%	73.42	227 / 245	4%	0.06	18 / 502
intestine	93%	109.48	902 / 966	1%	0.02	5 / 527
breast	89%	73.91	407 / 459	5%	0.09	51 / 1118
bladder	81%	54.67	17 / 21	3%	0.04	13 / 504
kidney	78%	65.40	69 / 89	5%	0.12	49 / 901
esophagus	76%	126.28	1102 / 1445	5%	0.10	10 / 183
adipose	76%	47.20	917 / 1204	0%	0	0 / 0
stomach	66%	41.07	237 / 359	2%	0.06	6 / 286
blood vessel	51%	27.29	686 / 1335	0%	0	0 / 0
peripheral blood	38%	87.55	356 / 929	0%	0	0 / 0
skin	34%	21.10	623 / 1809	1%	0.02	4 / 472
heart	18%	7.80	155 / 861	0%	0	0 / 0
adrenal gland	9%	3.54	22 / 258	0%	0	0 / 230
lymph node	0%	0	0 / 0	7%	0.19	2 / 29
pancreas	2%	0.58	5 / 328	4%	0.06	8 / 178
liver	2%	0.89	5 / 226	0%	0.01	2 / 406
tonsil	0%	0	0 / 0	2%	0.07	1 / 45
muscle	1%	0.49	9 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1