CEP15 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
neuron	6 studies	29% ± 17%	Explore
pancreatic A cell	4 studies	48% ± 18%	Explore
type B pancreatic cell	4 studies	43% ± 18%	Explore
retinal ganglion cell	4 studies	62% ± 27%	Explore
glutamatergic neuron	4 studies	41% ± 18%	Explore
epithelial cell	3 studies	24% ± 4%	Explore
amacrine cell	3 studies	36% ± 10%	Explore
ciliated cell	3 studies	24% ± 6%	Explore
GABAergic neuron	3 studies	35% ± 9%	Explore
luminal hormone-sensing cell of mammary gland	3 studies	27% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
eye	4 studies	22% ± 6%	Explore
pancreas	3 studies	46% ± 20%	Explore
brain	3 studies	32% ± 12%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
skin	99%	592.91	1786 / 1809	97%	11.27	458 / 472
adrenal gland	97%	512.05	251 / 258	95%	19.95	218 / 230
brain	100%	1953.10	2641 / 2642	89%	14.42	626 / 705
breast	88%	523.76	404 / 459	95%	23.65	1062 / 1118
prostate	98%	614.53	241 / 245	74%	12.23	369 / 502
ovary	91%	317.71	164 / 180	81%	5.66	347 / 430
thymus	81%	239.77	531 / 653	76%	3.68	460 / 605
bladder	86%	353.43	18 / 21	71%	8.34	357 / 504
kidney	92%	370.64	82 / 89	64%	3.72	578 / 901
pancreas	70%	203.45	230 / 328	82%	6.24	146 / 178
lung	66%	204.38	380 / 578	84%	7.96	969 / 1155
esophagus	94%	366.93	1364 / 1445	43%	2.98	78 / 183
uterus	84%	255.02	142 / 170	50%	5.56	230 / 459
intestine	70%	218.68	672 / 966	34%	2.25	177 / 527
blood vessel	91%	327.78	1221 / 1335	0%	0	0 / 0
eye	0%	0	0 / 0	80%	5.02	64 / 80
stomach	42%	128.96	152 / 359	37%	2.69	107 / 286
adipose	76%	217.31	910 / 1204	0%	0	0 / 0
tonsil	0%	0	0 / 0	76%	7.26	34 / 45
heart	50%	137.67	429 / 861	0%	0	0 / 0
lymph node	0%	0	0 / 0	41%	2.76	12 / 29
spleen	31%	64.89	75 / 241	0%	0	0 / 0
liver	4%	8.83	9 / 226	22%	1.44	91 / 406
peripheral blood	12%	50.03	116 / 929	0%	0	0 / 0
muscle	1%	2.03	8 / 803	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1