Name | Number of supported studies  | Average coverage | |
|---|---|---|---|
| retinal ganglion cell | 7 studies | 44% ± 18% | |
| glutamatergic neuron | 5 studies | 38% ± 14% | |
| amacrine cell | 4 studies | 51% ± 26% | |
| GABAergic neuron | 4 studies | 43% ± 6% | |
| granule cell | 3 studies | 41% ± 4% | |
| GABAergic amacrine cell | 3 studies | 24% ± 2% | |
| interneuron | 3 studies | 35% ± 13% |
Name | Number of supported studies | Average coverage | |
|---|---|---|---|
| brain | 5 studies | 28% ± 13% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
|---|---|---|---|---|---|---|
| brain | 76% | 537.08 | 2001 / 2642 | 23% | 0.50 | 161 / 705 |
| prostate | 33% | 52.62 | 81 / 245 | 47% | 1.71 | 237 / 502 |
| adrenal gland | 1% | 1.67 | 2 / 258 | 34% | 1.12 | 78 / 230 |
| breast | 3% | 3.09 | 15 / 459 | 10% | 0.45 | 107 / 1118 |
| skin | 0% | 0.25 | 5 / 1809 | 11% | 0.30 | 50 / 472 |
| tonsil | 0% | 0 | 0 / 0 | 7% | 0.14 | 3 / 45 |
| uterus | 0% | 0 | 0 / 170 | 4% | 0.09 | 18 / 459 |
| adipose | 3% | 4.31 | 36 / 1204 | 0% | 0 | 0 / 0 |
| lung | 0% | 0.12 | 1 / 578 | 3% | 0.06 | 31 / 1155 |
| eye | 0% | 0 | 0 / 0 | 3% | 0.04 | 2 / 80 |
| kidney | 0% | 0 | 0 / 89 | 2% | 0.19 | 19 / 901 |
| bladder | 0% | 0 | 0 / 21 | 2% | 0.08 | 8 / 504 |
| esophagus | 0% | 1.25 | 6 / 1445 | 1% | 0.02 | 2 / 183 |
| stomach | 0% | 0.20 | 1 / 359 | 1% | 0.04 | 3 / 286 |
| blood vessel | 1% | 1.68 | 17 / 1335 | 0% | 0 | 0 / 0 |
| ovary | 1% | 0.48 | 1 / 180 | 0% | 0.01 | 2 / 430 |
| liver | 0% | 0 | 0 / 226 | 1% | 0.02 | 4 / 406 |
| thymus | 0% | 0 | 0 / 653 | 1% | 0.02 | 5 / 605 |
| intestine | 0% | 0 | 0 / 966 | 1% | 0.01 | 4 / 527 |
| pancreas | 0% | 0 | 0 / 328 | 1% | 0.01 | 1 / 178 |
| muscle | 0% | 0.45 | 2 / 803 | 0% | 0 | 0 / 0 |
| abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
| lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
| nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| peripheral blood | 0% | 0 | 0 / 929 | 0% | 0 | 0 / 0 |
| placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
| spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
| ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
| GO_0007043 | Biological process | cell-cell junction assembly |
| GO_0007275 | Biological process | multicellular organism development |
| GO_0000902 | Biological process | cell morphogenesis |
| GO_0034332 | Biological process | adherens junction organization |
| GO_0007156 | Biological process | homophilic cell adhesion via plasma membrane adhesion molecules |
| GO_0098609 | Biological process | cell-cell adhesion |
| GO_0016477 | Biological process | cell migration |
| GO_0044331 | Biological process | cell-cell adhesion mediated by cadherin |
| GO_0016339 | Biological process | calcium-dependent cell-cell adhesion via plasma membrane cell adhesion molecules |
| GO_0005912 | Cellular component | adherens junction |
| GO_0005886 | Cellular component | plasma membrane |
| GO_0016342 | Cellular component | catenin complex |
| GO_0045296 | Molecular function | cadherin binding |
| GO_0005509 | Molecular function | calcium ion binding |
| GO_0008013 | Molecular function | beta-catenin binding |
| Gene name | CDH7 |
| Protein name | Cadherin-7 Cadherin 7 |
| Synonyms | CDH7L1 |
| Description | FUNCTION: Cadherins are calcium-dependent cell adhesion proteins. They preferentially interact with themselves in a homophilic manner in connecting cells; cadherins may thus contribute to the sorting of heterogeneous cell types. FUNCTION: Cadherins are calcium-dependent cell adhesion proteins. . |
| Accessions | Q9ULB5 ENST00000536984.6 ENST00000323011.7 F5H5X9 ENST00000397968.4 O60574 |
