CCM2L report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
endothelial cell	8 studies	21% ± 4%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	100%	650.10	652 / 653	96%	4.47	581 / 605
adrenal gland	99%	279.44	255 / 258	94%	4.75	217 / 230
brain	96%	222.61	2533 / 2642	97%	2.79	686 / 705
breast	100%	881.74	458 / 459	90%	2.64	1009 / 1118
prostate	98%	353.22	240 / 245	85%	1.93	427 / 502
kidney	99%	461.65	88 / 89	78%	6.09	704 / 901
lung	99%	720.29	570 / 578	67%	1.62	778 / 1155
bladder	100%	377.14	21 / 21	59%	1.24	299 / 504
ovary	73%	182.99	131 / 180	85%	2.53	366 / 430
stomach	90%	189.58	322 / 359	67%	2.00	192 / 286
uterus	100%	630.76	170 / 170	52%	1.38	238 / 459
intestine	96%	263.64	931 / 966	55%	1.10	291 / 527
esophagus	93%	302.74	1347 / 1445	55%	1.20	101 / 183
pancreas	38%	50.86	126 / 328	87%	2.37	155 / 178
skin	63%	142.42	1146 / 1809	47%	0.92	223 / 472
liver	26%	35.28	58 / 226	78%	1.68	317 / 406
spleen	100%	7503.36	241 / 241	0%	0	0 / 0
adipose	100%	902.71	1200 / 1204	0%	0	0 / 0
heart	98%	485.42	848 / 861	0%	0	0 / 0
muscle	89%	157.54	711 / 803	0%	0	0 / 0
blood vessel	74%	206.48	986 / 1335	0%	0	0 / 0
lymph node	0%	0	0 / 0	55%	1.03	16 / 29
tonsil	0%	0	0 / 0	49%	0.78	22 / 45
eye	0%	0	0 / 0	19%	0.26	15 / 80
peripheral blood	1%	1.75	10 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1