CATSPERG report

Query

Invalid input gene. Please select from the suggestions.

I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
glutamatergic neuron	3 studies	24% ± 6%	Explore

II. Expression across tissues

sc-RNAseq dataData table

Name	Number of supported studies	Average coverage
brain	4 studies	18% ± 2%	Explore

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
prostate	100%	212.54	245 / 245	91%	1.68	458 / 502
thymus	100%	278.94	653 / 653	76%	1.54	462 / 605
breast	100%	209.88	459 / 459	68%	1.71	758 / 1118
ovary	100%	122.86	180 / 180	59%	1.44	254 / 430
lung	100%	154.39	578 / 578	35%	0.80	400 / 1155
kidney	100%	124.64	89 / 89	33%	1.80	294 / 901
esophagus	98%	84.80	1418 / 1445	26%	0.59	48 / 183
brain	99%	292.49	2615 / 2642	25%	0.40	173 / 705
uterus	99%	150.74	169 / 170	23%	0.43	105 / 459
bladder	95%	88.29	20 / 21	25%	0.50	126 / 504
pancreas	90%	61.94	296 / 328	23%	0.46	41 / 178
stomach	98%	80.91	352 / 359	15%	0.29	42 / 286
intestine	98%	116.14	950 / 966	11%	0.18	59 / 527
spleen	100%	139.09	241 / 241	0%	0	0 / 0
adipose	100%	114.72	1201 / 1204	0%	0	0 / 0
blood vessel	99%	104.24	1320 / 1335	0%	0	0 / 0
liver	91%	64.00	206 / 226	5%	0.10	22 / 406
adrenal gland	92%	62.59	238 / 258	4%	0.24	9 / 230
peripheral blood	83%	68.11	774 / 929	0%	0	0 / 0
skin	74%	189.58	1343 / 1809	4%	0.06	19 / 472
heart	73%	42.56	625 / 861	0%	0	0 / 0
muscle	43%	26.62	345 / 803	0%	0	0 / 0
tonsil	0%	0	0 / 0	9%	0.12	4 / 45
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1