CATSPERD report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
ciliated cell	16 studies	43% ± 14%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
lung	85%	73.99	494 / 578	11%	0.37	130 / 1155
blood vessel	79%	10.69	1058 / 1335	0%	0	0 / 0
bladder	62%	5.00	13 / 21	1%	0.01	3 / 504
uterus	59%	20.13	100 / 170	2%	0.13	11 / 459
skin	53%	5.89	967 / 1809	2%	0.05	9 / 472
prostate	53%	5.79	130 / 245	2%	0.06	10 / 502
breast	53%	5.28	245 / 459	1%	0.01	7 / 1118
ovary	37%	2.91	67 / 180	9%	0.43	39 / 430
intestine	44%	4.51	424 / 966	2%	0.03	10 / 527
esophagus	44%	4.10	643 / 1445	1%	0.04	2 / 183
adipose	42%	3.33	503 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	40%	0.98	32 / 80
stomach	32%	2.35	114 / 359	6%	0.12	17 / 286
brain	34%	8.95	886 / 2642	2%	0.06	13 / 705
pancreas	25%	1.40	82 / 328	1%	0.01	1 / 178
thymus	24%	1.81	159 / 653	0%	0.00	1 / 605
spleen	18%	0.76	43 / 241	0%	0	0 / 0
muscle	17%	1.24	138 / 803	0%	0	0 / 0
adrenal gland	17%	0.74	43 / 258	0%	0	0 / 230
kidney	15%	0.80	13 / 89	1%	0.05	8 / 901
peripheral blood	12%	0.89	108 / 929	0%	0	0 / 0
liver	10%	0.55	23 / 226	0%	0.01	1 / 406
heart	10%	0.47	87 / 861	0%	0	0 / 0
tonsil	0%	0	0 / 0	2%	0.03	1 / 45
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1