CAPN9 report

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
goblet cell	5 studies	37% ± 10%	Explore
retinal rod cell	3 studies	30% ± 8%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
brain	99%	82.79	2616 / 2642	62%	2.63	439 / 705
stomach	91%	1729.72	327 / 359	58%	7.57	167 / 286
intestine	77%	621.22	746 / 966	70%	12.24	368 / 527
lung	99%	426.56	570 / 578	44%	6.30	509 / 1155
prostate	82%	64.04	201 / 245	50%	2.72	253 / 502
breast	49%	29.04	224 / 459	73%	10.90	811 / 1118
ovary	48%	20.06	86 / 180	62%	5.82	266 / 430
bladder	67%	220.62	14 / 21	41%	5.65	208 / 504
pancreas	10%	7.94	33 / 328	70%	18.33	124 / 178
adrenal gland	75%	75.05	193 / 258	3%	0.13	7 / 230
heart	59%	19.86	508 / 861	0%	0	0 / 0
esophagus	19%	11.74	269 / 1445	31%	3.82	57 / 183
muscle	38%	11.03	303 / 803	0%	0	0 / 0
skin	30%	10.26	545 / 1809	4%	0.18	20 / 472
uterus	15%	5.45	26 / 170	16%	1.17	72 / 459
thymus	23%	5.78	149 / 653	4%	0.23	25 / 605
kidney	18%	4.11	16 / 89	1%	0.03	7 / 901
blood vessel	18%	4.13	238 / 1335	0%	0	0 / 0
liver	1%	0.23	2 / 226	7%	0.51	29 / 406
adipose	4%	1.75	50 / 1204	0%	0	0 / 0
eye	0%	0	0 / 0	4%	0.13	3 / 80
tonsil	0%	0	0 / 0	2%	0.05	1 / 45
spleen	1%	0.23	3 / 241	0%	0	0 / 0
peripheral blood	0%	0.13	3 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1