CALR3 | OmnibusX

sc-RNAseq data

Insufficient scRNA-seq data for expression of CALR3 at tissue level.

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
liver	66%	2.98	150 / 226	0%	0.02	2 / 406
pancreas	66%	2.34	216 / 328	0%	0	0 / 178
spleen	63%	2.23	151 / 241	0%	0	0 / 0
thymus	58%	2.98	381 / 653	0%	0	0 / 605
prostate	56%	5.57	136 / 245	0%	0	0 / 502
adrenal gland	55%	2.02	143 / 258	0%	0	0 / 230
ovary	51%	1.29	91 / 180	1%	0.04	5 / 430
kidney	51%	1.82	45 / 89	0%	0.01	1 / 901
peripheral blood	50%	2.29	461 / 929	0%	0	0 / 0
skin	49%	1.85	893 / 1809	0%	0	0 / 472
muscle	46%	2.17	371 / 803	0%	0	0 / 0
breast	46%	3.64	209 / 459	0%	0.04	3 / 1118
uterus	43%	1.14	73 / 170	0%	0	0 / 459
stomach	42%	1.24	149 / 359	1%	0.02	4 / 286
lung	42%	1.35	243 / 578	0%	0.01	4 / 1155
intestine	41%	1.31	398 / 966	0%	0.00	1 / 527
adipose	41%	1.35	497 / 1204	0%	0	0 / 0
esophagus	39%	1.31	558 / 1445	1%	0.01	1 / 183
brain	38%	1.06	1009 / 2642	0%	0.01	1 / 705
bladder	38%	0.76	8 / 21	0%	0	0 / 504
blood vessel	35%	0.79	461 / 1335	0%	0	0 / 0
heart	29%	0.71	246 / 861	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
eye	0%	0	0 / 0	0%	0	0 / 80
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
tonsil	0%	0	0 / 0	0%	0	0 / 45
ureter	0%	0	0 / 0	0%	0	0 / 1

GO_0006457	Biological process	protein folding
GO_0007283	Biological process	spermatogenesis
GO_0030154	Biological process	cell differentiation
GO_0008150	Biological process	biological_process
GO_0036503	Biological process	ERAD pathway
GO_0005788	Cellular component	endoplasmic reticulum lumen
GO_0005635	Cellular component	nuclear envelope
GO_0005789	Cellular component	endoplasmic reticulum membrane
GO_0044183	Molecular function	protein folding chaperone
GO_0051082	Molecular function	unfolded protein binding
GO_0005509	Molecular function	calcium ion binding
GO_0030246	Molecular function	carbohydrate binding

Gene name	CALR3
Protein name	Calreticulin 3 Calreticulin-3 (Calreticulin-2) (Calsperin)
Synonyms	CRT2
Description	FUNCTION: During spermatogenesis, may act as a lectin-independent chaperone for specific client proteins such as ADAM3. Required for sperm fertility (By similarity). CALR3 capacity for calcium-binding may be absent or much lower than that of CALR. .
Accessions	A0A7R6RQ58 ENST00000600762.1 Q96L12 M0R0Y8 ENST00000269881.8

CALR3 report