Name | Number of supported studies | Average coverage | |
---|---|---|---|
astrocyte | 15 studies | 32% ± 15% | |
glutamatergic neuron | 13 studies | 55% ± 20% | |
GABAergic neuron | 9 studies | 47% ± 19% | |
oligodendrocyte | 8 studies | 31% ± 18% | |
interneuron | 6 studies | 48% ± 21% | |
oligodendrocyte precursor cell | 5 studies | 36% ± 20% | |
neuron | 4 studies | 36% ± 10% | |
endothelial cell | 4 studies | 35% ± 15% | |
granule cell | 4 studies | 68% ± 31% | |
microglial cell | 4 studies | 34% ± 22% | |
GABAergic interneuron | 3 studies | 46% ± 4% | |
GABAergic amacrine cell | 3 studies | 27% ± 7% | |
glycinergic amacrine cell | 3 studies | 35% ± 19% |
Name | Number of supported studies | Average coverage | |
---|---|---|---|
brain | 15 studies | 38% ± 17% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
brain | 99% | 6491.84 | 2615 / 2642 | 83% | 17.79 | 583 / 705 |
adrenal gland | 97% | 2461.03 | 251 / 258 | 27% | 4.84 | 62 / 230 |
skin | 50% | 289.26 | 907 / 1809 | 5% | 0.46 | 24 / 472 |
pancreas | 8% | 43.99 | 27 / 328 | 10% | 0.27 | 17 / 178 |
uterus | 5% | 35.80 | 9 / 170 | 12% | 0.58 | 57 / 459 |
thymus | 0% | 0 | 0 / 653 | 13% | 2.36 | 78 / 605 |
ovary | 0% | 0 | 0 / 180 | 11% | 0.33 | 46 / 430 |
prostate | 2% | 12.60 | 6 / 245 | 8% | 0.43 | 40 / 502 |
tonsil | 0% | 0 | 0 / 0 | 9% | 0.28 | 4 / 45 |
esophagus | 0% | 0 | 0 / 1445 | 8% | 0.31 | 15 / 183 |
lung | 0% | 0 | 0 / 578 | 6% | 0.31 | 75 / 1155 |
breast | 0% | 2.66 | 2 / 459 | 3% | 0.12 | 30 / 1118 |
bladder | 0% | 0 | 0 / 21 | 3% | 0.09 | 14 / 504 |
eye | 0% | 0 | 0 / 0 | 3% | 0.07 | 2 / 80 |
stomach | 0% | 0 | 0 / 359 | 2% | 0.10 | 7 / 286 |
liver | 0% | 0 | 0 / 226 | 2% | 0.11 | 8 / 406 |
kidney | 0% | 0 | 0 / 89 | 1% | 0.13 | 13 / 901 |
intestine | 0% | 0.34 | 1 / 966 | 1% | 0.05 | 7 / 527 |
adipose | 0% | 1.24 | 3 / 1204 | 0% | 0 | 0 / 0 |
peripheral blood | 0% | 4.42 | 1 / 929 | 0% | 0 | 0 / 0 |
blood vessel | 0% | 0.26 | 1 / 1335 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
heart | 0% | 0 | 0 / 861 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 29 |
muscle | 0% | 0 | 0 / 803 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spleen | 0% | 0 | 0 / 241 | 0% | 0 | 0 / 0 |
ureter | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 1 |
GO_0032588 | Cellular component | trans-Golgi network membrane |
GO_0005886 | Cellular component | plasma membrane |
GO_0048471 | Cellular component | perinuclear region of cytoplasm |
GO_0005509 | Molecular function | calcium ion binding |
GO_0005515 | Molecular function | protein binding |
Gene name | CALN1 |
Protein name | Calneuron 1 Uncharacterized protein CALN1 Calcium-binding protein 8 (CaBP8) (Calneuron I) (Calneuron-1) Calneuron 1 (cDNA FLJ41868 fis, clone OCBBF2007194, highly similar to Calneuron-1 (Calcium-binding protein CaBP8)) Alternative protein CALN1 |
Synonyms | tcag7.520 CABP8 |
Description | FUNCTION: Negatively regulates Golgi-to-plasma membrane trafficking by interacting with PI4KB and inhibiting its activity. May play a role in the physiology of neurons and is potentially important in memory and learning. . |
Accessions | ENST00000395276.6 [Q9BXU9-1] ENST00000431984.5 [Q9BXU9-1] ENST00000446128.1 ENST00000329008.9 [Q9BXU9-1] Q75MI2 ENST00000395275.7 [Q9BXU9-2] Q9BXU9 Q86UM7 Q86UL5 Q75MW5 A4D1Z1 E9PFU3 Q75MP5 L8ECK9 |