Name | Number of supported studies | Average coverage | |
---|---|---|---|
classical monocyte | 3 studies | 16% ± 0% | |
epithelial cell | 3 studies | 35% ± 10% | |
retinal cone cell | 3 studies | 20% ± 2% | |
ciliated cell | 3 studies | 25% ± 9% |
Tissue | GTEx Coverage | GTEx Average TPM | GTEx Number of samples | TCGA Coverage | TCGA Average TPM | TCGA Number of samples |
---|---|---|---|---|---|---|
esophagus | 100% | 1391.26 | 1445 / 1445 | 100% | 18.14 | 183 / 183 |
lung | 100% | 1325.49 | 578 / 578 | 100% | 17.08 | 1155 / 1155 |
ovary | 100% | 2209.21 | 180 / 180 | 100% | 18.98 | 430 / 430 |
brain | 100% | 1375.88 | 2641 / 2642 | 100% | 28.12 | 705 / 705 |
breast | 100% | 1497.37 | 459 / 459 | 100% | 17.47 | 1117 / 1118 |
prostate | 100% | 1527.02 | 245 / 245 | 100% | 14.53 | 501 / 502 |
stomach | 100% | 1426.81 | 359 / 359 | 100% | 15.80 | 285 / 286 |
bladder | 100% | 1496.62 | 21 / 21 | 100% | 14.37 | 502 / 504 |
intestine | 100% | 1495.33 | 966 / 966 | 99% | 15.62 | 524 / 527 |
thymus | 100% | 1658.59 | 653 / 653 | 99% | 16.74 | 601 / 605 |
uterus | 100% | 1917.86 | 170 / 170 | 99% | 15.37 | 455 / 459 |
pancreas | 100% | 907.02 | 327 / 328 | 99% | 13.27 | 176 / 178 |
kidney | 100% | 1056.42 | 89 / 89 | 96% | 11.27 | 868 / 901 |
adrenal gland | 100% | 1240.97 | 258 / 258 | 95% | 10.40 | 219 / 230 |
skin | 100% | 1511.76 | 1809 / 1809 | 95% | 12.40 | 447 / 472 |
liver | 100% | 729.52 | 226 / 226 | 94% | 7.19 | 383 / 406 |
adipose | 100% | 1415.44 | 1204 / 1204 | 0% | 0 | 0 / 0 |
blood vessel | 100% | 1431.01 | 1335 / 1335 | 0% | 0 | 0 / 0 |
lymph node | 0% | 0 | 0 / 0 | 100% | 12.13 | 29 / 29 |
muscle | 100% | 1082.80 | 803 / 803 | 0% | 0 | 0 / 0 |
spleen | 100% | 1488.65 | 241 / 241 | 0% | 0 | 0 / 0 |
tonsil | 0% | 0 | 0 / 0 | 100% | 13.32 | 45 / 45 |
ureter | 0% | 0 | 0 / 0 | 100% | 6.10 | 1 / 1 |
heart | 99% | 902.03 | 853 / 861 | 0% | 0 | 0 / 0 |
eye | 0% | 0 | 0 / 0 | 89% | 9.24 | 71 / 80 |
peripheral blood | 79% | 816.48 | 735 / 929 | 0% | 0 | 0 / 0 |
abdomen | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
bone marrow | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
diaphragm | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
gingiva | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasal cavity | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nasopharynx | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
nose | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
placenta | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
spinal column | 0% | 0 | 0 / 0 | 0% | 0 | 0 / 0 |
GO_0048598 | Biological process | embryonic morphogenesis |
GO_0008150 | Biological process | biological_process |
GO_0006388 | Biological process | tRNA splicing, via endonucleolytic cleavage and ligation |
GO_0005737 | Cellular component | cytoplasm |
GO_0005654 | Cellular component | nucleoplasm |
GO_0072669 | Cellular component | tRNA-splicing ligase complex |
GO_0005634 | Cellular component | nucleus |
GO_0005515 | Molecular function | protein binding |
GO_0003674 | Molecular function | molecular_function |
Gene name | C2orf49 |
Protein name | Ashwin |
Synonyms | |
Description | |
Accessions | C9J4K0 Q9BVC5 ENST00000258457.7 [Q9BVC5-1] ENST00000410049.1 |