C16orf89 report

Query

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I. Expression across cell types

Cell ontologyData table

Name	Number of supported studies	Average coverage
type II pneumocyte	10 studies	58% ± 24%	Explore
club cell	6 studies	42% ± 29%	Explore
fibroblast	5 studies	25% ± 8%	Explore
type I pneumocyte	4 studies	30% ± 11%	Explore
kidney loop of Henle epithelial cell	4 studies	25% ± 4%	Explore
epithelial cell	3 studies	44% ± 16%	Explore

II. Expression across tissues

Bulk RNAseq dataData table

Tissue	GTEx Coverage	GTEx Average TPM	GTEx Number of samples	TCGA Coverage	TCGA Average TPM	TCGA Number of samples
thymus	100%	11978.14	652 / 653	93%	437.35	561 / 605
lung	99%	3203.26	574 / 578	60%	178.56	698 / 1155
brain	98%	1104.95	2576 / 2642	52%	15.77	367 / 705
stomach	99%	3412.35	355 / 359	11%	2.39	31 / 286
kidney	96%	990.88	85 / 89	12%	11.13	112 / 901
breast	71%	573.14	326 / 459	35%	23.06	388 / 1118
bladder	76%	858.38	16 / 21	9%	20.48	44 / 504
prostate	60%	309.13	148 / 245	10%	2.08	51 / 502
intestine	65%	432.05	627 / 966	5%	1.14	24 / 527
heart	65%	577.39	558 / 861	0%	0	0 / 0
pancreas	32%	169.55	104 / 328	29%	7.71	52 / 178
uterus	38%	191.66	65 / 170	11%	5.40	50 / 459
adipose	49%	423.69	588 / 1204	0%	0	0 / 0
blood vessel	46%	252.08	609 / 1335	0%	0	0 / 0
esophagus	34%	197.31	492 / 1445	2%	1.41	4 / 183
adrenal gland	30%	96.66	77 / 258	6%	1.49	14 / 230
ovary	19%	159.76	35 / 180	8%	3.40	33 / 430
skin	2%	9.99	41 / 1809	13%	6.47	60 / 472
spleen	7%	19.85	17 / 241	0%	0	0 / 0
eye	0%	0	0 / 0	6%	3.60	5 / 80
tonsil	0%	0	0 / 0	2%	1.07	1 / 45
liver	1%	2.18	2 / 226	1%	4.30	3 / 406
muscle	0%	1.11	3 / 803	0%	0	0 / 0
peripheral blood	0%	0.58	2 / 929	0%	0	0 / 0
abdomen	0%	0	0 / 0	0%	0	0 / 0
bone marrow	0%	0	0 / 0	0%	0	0 / 0
diaphragm	0%	0	0 / 0	0%	0	0 / 0
gingiva	0%	0	0 / 0	0%	0	0 / 0
lymph node	0%	0	0 / 0	0%	0	0 / 29
nasal cavity	0%	0	0 / 0	0%	0	0 / 0
nasopharynx	0%	0	0 / 0	0%	0	0 / 0
nose	0%	0	0 / 0	0%	0	0 / 0
placenta	0%	0	0 / 0	0%	0	0 / 0
spinal column	0%	0	0 / 0	0%	0	0 / 0
ureter	0%	0	0 / 0	0%	0	0 / 1